Alei085584.1
Basic Information
- Insect
- Aquatica leii
- Gene Symbol
- lrrfip2
- Assembly
- GCA_035610365.1
- Location
- CM069436.1:95137462-95139179[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.092 1.1e+04 -2.0 0.7 235 271 19 55 15 63 0.63 2 3 1.5e-106 1.8e-101 342.1 29.8 1 300 84 377 84 377 0.93 3 3 0.033 4e+03 -0.5 6.7 120 168 375 423 375 451 0.74
Sequence Information
- Coding Sequence
- ATGAATGacacagaaacaaaaaattccacACCATGTACTGGTAGTGTTGATTCGTTAAccgatattttaaataatttaaattccgAAGACGACGAAAATGATCAAAATTCAGAAAACGAATCAGATCGTGCACGATCAAATGTCAATTTATTAGAtgcaaaagaaaacatatcTGAAGCAAGCAGTATATGTTATGAAGAGAACCAAGGAAATCTTATTACtcaatttcttaattgttgTACCGATGATgCCGAAGCTCGCCTTTTAGCAAGGCGGCAAGCTCGAGCAGAAGCTAGAGATATACGTATGCGCGAGTTAGAGCGCcaacaaaaagaacaagaagaaaatgCCGATAGACAGTATGATATGATAGAACAATCCCATCGTACTACTAGAACTACTGGTAATCGATATTTATCTAGTCGCCGAAGTTCAGAAGATTCGTTAGAAGATGGAGGAAGCATTAGAGAAATACGACACGAACtcaaagaaatggaagaaaagtttagAAAAGCTATGATTGCTAATGCTCAATTAGACAATGATAAAACGTCCCAAACATATCAATTGGAACTTCTTAAGGATAGATTAGAAGAGTTGGAAGAGGAATTTTCTCAACTTCGCCGCGAGCATCGGGATAAGTGTCGAGAACACGATCAACTTGCGAGATTAGCAACACGTTTAAAAGACGATTTTGCTGTTACTCGTTTACAATTGGAAGAGAGGGATCGATTAATTGCCGAAAAAGGTTTAGTGATTGTAACAGAAGATACTTCTTTTTATGAAGAAGATGGAAGAGGAGATGGTACTGTCAATGGCACCTGtggtagtttaaaaaaatcgttggtTAGTACCGAAAATGCGCAGTTATTAGAAAATGCTGGAGAAGGTAGTTTAGATGTTCGATTAGCCAAATttgctttagaaaaaaaagaccTACAAGACCAAATCAGTCATTTAAGATTAGAACTAGAAGAAGAAAAGAGTAGAAAAAGGAAGGCTAGCGGGATAACTTTAAACGGGCCCACATCTGATTGCGATTATGATCCAGACGATGTTCAAAGAGACGTGGGGAGACAACTGGCGGATTTTAAATTTCGAGCTCAAAAAGCGGAGCAGGATGTGGCTACATTGCAAGCTACGGTGGCCAGATTAGAAAGTCAAGTTATTAGATATAAATCGGCTGCAGAAATATATGAAAAGTCTGAAGAAGCTCTTAAACAAGAAAAGAGGAAATTGCAGAGAGAGgCAAGGGAAGCACAAAATCGATCAGAAGAGTTGGAAACCgcaaataatcatttattaaaacgtttagaCAAGCttaaaaatgccaaatcaacgctACTTAAAGAACTCTGA
- Protein Sequence
- MNDTETKNSTPCTGSVDSLTDILNNLNSEDDENDQNSENESDRARSNVNLLDAKENISEASSICYEENQGNLITQFLNCCTDDAEARLLARRQARAEARDIRMRELERQQKEQEENADRQYDMIEQSHRTTRTTGNRYLSSRRSSEDSLEDGGSIREIRHELKEMEEKFRKAMIANAQLDNDKTSQTYQLELLKDRLEELEEEFSQLRREHRDKCREHDQLARLATRLKDDFAVTRLQLEERDRLIAEKGLVIVTEDTSFYEEDGRGDGTVNGTCGSLKKSLVSTENAQLLENAGEGSLDVRLAKFALEKKDLQDQISHLRLELEEEKSRKRKASGITLNGPTSDCDYDPDDVQRDVGRQLADFKFRAQKAEQDVATLQATVARLESQVIRYKSAAEIYEKSEEALKQEKRKLQREAREAQNRSEELETANNHLLKRLDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00151782;
- 90% Identity
- iTF_00151782;
- 80% Identity
- -