Achr003704.1
Basic Information
- Insect
- Anopheles christyi
- Gene Symbol
- stc
- Assembly
- GCA_000349165.1
- Location
- KB691957:6489-9655[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.9 1e+04 -4.0 1.6 15 19 314 318 313 318 0.81 2 16 0.17 9e+02 -0.7 0.4 4 10 347 353 346 354 0.94 3 16 4.4e-06 0.024 14.0 17.6 3 19 360 376 349 376 0.84 4 16 1.8 1e+04 -4.0 1.2 6 10 402 406 402 406 0.96 5 16 1.8e-05 0.097 12.0 12.7 1 19 412 430 412 430 0.92 6 16 2 1.1e+04 -6.9 3.8 4 11 435 438 434 440 0.54 7 16 1.9e-10 1e-06 27.9 13.3 1 18 470 487 470 488 0.98 8 16 0.0019 10 5.5 17.6 1 19 529 551 529 551 0.89 9 16 0.0096 52 3.3 7.0 1 11 591 601 591 602 0.94 10 16 0.58 3.1e+03 -2.4 1.0 4 10 606 612 605 612 0.90 11 16 1.3e-08 7.2e-05 22.0 17.9 1 18 618 635 618 636 0.98 12 16 1.2 6.3e+03 -3.4 0.4 6 10 665 669 664 670 0.75 13 16 2 1.1e+04 -4.8 9.6 4 18 673 692 672 693 0.71 14 16 2.4e-05 0.13 11.6 7.0 1 12 729 740 729 743 0.92 15 16 0.0011 6.2 6.3 12.2 1 19 762 781 762 781 0.93 16 16 0.19 1.1e+03 -0.9 0.8 7 12 796 801 790 801 0.70
Sequence Information
- Coding Sequence
- ATGGCAACGAGCGAAGGTGGTAATGCTGCCAGTAGTGGCAGCAACACCAGCAACAGCTTCGACGACTTCATATCCCAGTTTAATGCACGGGTGCAAATACAGCAACAACTGCAATACCTCCGGACGCATCATACCACCAACAACCACCAGCAGCTGCCGGCGGATGACCAGCAACCGTCAGCGTTCCAGTATTATGGCTTTACCTCCAATCTGACCCCAACTGCAGCTGAATTTGTCCCCCGTAAGTATCAAGCCGACTCGAACGATGTGGACGGCGCGCTTCCGCAAGCGACAGTTTCGATGGCCCCCGTCACGCCTGCATCCGCCAGACCGACTGTCAATGCCGATGATGATGCAGACGATCGTGAGAACACTTTGCGTGCTGGATCATCTAATCACTACGGAGGAGGAGGAAGCAGGTCATCTGCCGGTGGCCGTCCACGTAGAAACGAAAGCCTTAAGCCACGGAATGGGTGGCATACGAGAGACGACCGGCCCGTCGGACGGCAGGGAAAGTGGAAAGCCAACCAACAAACTGCCGGAAGCGGTCGCTTTCGACCGCACGATGATGATTATTCGGGTGATTTGGCACCACGGAATGGGGAAAACAATTCACGCCGTGTCGGACAAAGACAGTGGGGAAATCGTATCATACAACCCGATTCGGAGGAAAGACGCACAAACGGACAGTCGAAAGGGGAAAGCAAGTCTGCTGCTAAGCCAGAATCACCGACGATAACACCCCTGTCCAAGTGTTCTCAGCGTGAGAAGCTTATGCGCGAGATCGAATGCTACCGGCTGGAGTGTCTGGTATGTTGTGAAATTGTGAAACCGATGCAATCGATCTGGTCCTGTGGAAATTGCTACCACATACTGCATCTCGGGTGCGTTACCAAGTGGGCCACCAGCTCGCAGTCCGAGGATGGTTCGGGTTGGCGCTGCCCGGCCTGTCAGCACGTGTCGAAAAAGGTCCCACGGGAGTACTTTTGTTTTTGTGGAAAGCAGAAAAATCCTGCCTTTAATCGGGAAGATTTGGCACACTCGTGTGGCGATGTCTGTGGTAGGCGGGAGGTATGTGAGCACGCCTGTACGCTGCTTTGCCACCCGGGACCTTGTCCACCGTGTCAGGCTACGGTGCAGCGGAAATGCGGATGTGGACGGTTGGAAAAATCGGTACAATGCTGCCAGAAGGAGGAGCTGCTGTGTGAGGCCGTATGCGATAAGCCGTTGAACTGTGAACAACACAGGTGCGTGAAACGGTGCCATCCGGGTAGTTGTGACACGTGTACGGAACAGGTTCAACACAACTGTCACTGTGGTAAGACCGAACGTATGGTGGTGTGCAGCGTGGAGAACCTTGCCGTTACGCGATACGGCTGTGGCAAAACGTGCGAACTTCCGCTGGGCTGTGGAAACCATCAATGTCAGCGGCTGTGCCACGAGGGTGAGTGCGATCCGTGTGCCGACGCACCGGAACGTGTTCTTAGCTGTCCATGTGGACGGGAAGCGATTGGGCACGGGAGTCGCGAATCCTGTCTCGATCCGATACCGACCTGTTCCGGCACTTGCGGGCGTAAGCTGTCCTGTGGCCCACCGGGTGCTAATCATTGCTGTGATGCTCCGTGCCATCGGAGCGACTGTCCACCATGCAAAAAGTCCACCACGGTAAAATGTCGGTGCGGCAGCATGGATCAGCCGATGAAGTGCAAAGACCTGACAACGCGTGCCGATGATGCGCGGTGCAAAAAGCGTTGCGTGCGGAGACGCAGCTGCGCGAAACATAAATGCAACCAGGTGTGCTGCATCGATTTTGATCACATCTGTCCGAAAACGTGCTCGCTGCCGTTGTCCTGCGGTCGGCATCGCTGTGATAAGCCCTGCCACAAAGGTAACTGTCGGCCGTGTCATCGCGTTTCGTTCGACGAGCTGACGTGTGACTGCGGTGCAAATGTGATCTATCCTCCCGTACCGTGCGGAACTAGGAAACCGGCCTGTGATCGTCCTTGCAATCGGAGACATGCGTGTGAACATCCGGCACTGCACAATTGTCACGCCGAGGCGGAGTGTCCGCCGTGCGTCGTGCTGACGTCAAAGTACTGCCATGGAAAGCACGAACAGCGTAAAACTATCCCCTGCTATCAGGCATCGTTCAGTTGTGGTATGCCATGTGCAAAACCCCTGCCCTGCGGTCGGCACAAATGTATCCGAGCATGCCATGACGATGTATGTATACAGGAGGGAGCATCTGTGTGTAAGCAGAACTGTACGAAGACAAGGGATACTTGTTCCCATCCGTGCAATGCACCGTGTCACGAGGCGGAATGTCCAGATATACCGTGCAAGATTGTCGTGGAGGTCACGTGCGAGTGTGGCAATCGGAAGCAGCAGCGCACGTGTCACGATTTCTCCAAAGAGTACCGACGCATAGCAACCGCACAGCTTGCCTCGTCCGTGCAGGAAATGCAGCGCGGTGGATCGGTTGAGCTGAGTGACATATTAGGACCGATGCGACCGAAAAATAATAAAACACTAGAATGCAACGAAGAGTGCAGAATGCTGGAGCGTAACCGCCGTCTCGCGATTGCACTGCAAATCCGCAATCCCGACCTAGCCTCCAAACTGCATCCGAACTATTCGGAAACGTTGCGTGCATACGCAAAGAAAGATCCCGCCCTGGTGCAGATGATTCACGAAAAGCTAACCGAACTGGTGAAGTTGGCCAAGGAGAGCAAACAAAAATCACGCTCCCACTCGTTCCCGGTGATGAACCGCGAAAAGCGAGAAATCGTGAACGAAATGTGTAACATGTTTGGGGTGGAAGCGGTCGCGTACGATGCGGAACCAAATCGGAACGTCGTCGCGACGGCGGATCGCTTTACGTCCTGGATTCCGAGCATGAGTCTGATGGAGGTATTGCAGCGAGAGAACGGCCAACGACGAATCGTCGTACCGAATATGAATGCTTGGGGCAAAACGAATTTGGCCGGTGCCCCTAGCTCTAGCAGTAAATGA
- Protein Sequence
- MATSEGGNAASSGSNTSNSFDDFISQFNARVQIQQQLQYLRTHHTTNNHQQLPADDQQPSAFQYYGFTSNLTPTAAEFVPRKYQADSNDVDGALPQATVSMAPVTPASARPTVNADDDADDRENTLRAGSSNHYGGGGSRSSAGGRPRRNESLKPRNGWHTRDDRPVGRQGKWKANQQTAGSGRFRPHDDDYSGDLAPRNGENNSRRVGQRQWGNRIIQPDSEERRTNGQSKGESKSAAKPESPTITPLSKCSQREKLMREIECYRLECLVCCEIVKPMQSIWSCGNCYHILHLGCVTKWATSSQSEDGSGWRCPACQHVSKKVPREYFCFCGKQKNPAFNREDLAHSCGDVCGRREVCEHACTLLCHPGPCPPCQATVQRKCGCGRLEKSVQCCQKEELLCEAVCDKPLNCEQHRCVKRCHPGSCDTCTEQVQHNCHCGKTERMVVCSVENLAVTRYGCGKTCELPLGCGNHQCQRLCHEGECDPCADAPERVLSCPCGREAIGHGSRESCLDPIPTCSGTCGRKLSCGPPGANHCCDAPCHRSDCPPCKKSTTVKCRCGSMDQPMKCKDLTTRADDARCKKRCVRRRSCAKHKCNQVCCIDFDHICPKTCSLPLSCGRHRCDKPCHKGNCRPCHRVSFDELTCDCGANVIYPPVPCGTRKPACDRPCNRRHACEHPALHNCHAEAECPPCVVLTSKYCHGKHEQRKTIPCYQASFSCGMPCAKPLPCGRHKCIRACHDDVCIQEGASVCKQNCTKTRDTCSHPCNAPCHEAECPDIPCKIVVEVTCECGNRKQQRTCHDFSKEYRRIATAQLASSVQEMQRGGSVELSDILGPMRPKNNKTLECNEECRMLERNRRLAIALQIRNPDLASKLHPNYSETLRAYAKKDPALVQMIHEKLTELVKLAKESKQKSRSHSFPVMNREKREIVNEMCNMFGVEAVAYDAEPNRNVVATADRFTSWIPSMSLMEVLQRENGQRRIVVPNMNAWGKTNLAGAPSSSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00098185; iTF_00100012; iTF_00108824; iTF_00105531; iTF_00102078; iTF_00099380; iTF_00103369; iTF_00100684; iTF_00106713; iTF_00104084; iTF_00107388; iTF_00096069; iTF_00104843; iTF_00102766; iTF_00101376; iTF_00093875;
- 90% Identity
- -
- 80% Identity
- -