Afar008382.1
Basic Information
- Insect
- Anopheles farauti
- Gene Symbol
- stc
- Assembly
- GCA_000473445.2
- Location
- KI915042.1:3118647-3121793[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.9 1.2e+04 -4.0 1.6 15 19 303 307 302 307 0.81 2 13 0.21 1.4e+03 -1.0 0.5 4 10 336 342 335 342 0.90 3 13 9.8e-06 0.063 12.9 18.1 3 19 349 365 338 365 0.86 4 13 4.4e-07 0.0028 17.2 9.9 1 18 401 418 401 419 0.94 5 13 5.6e-10 3.6e-06 26.4 11.8 1 18 459 476 459 477 0.98 6 13 2e-05 0.13 11.9 17.3 1 19 518 540 518 540 0.90 7 13 0.0095 61 3.3 7.0 1 11 580 590 580 591 0.94 8 13 0.57 3.7e+03 -2.4 1.0 4 10 595 601 594 601 0.90 9 13 1.3e-08 8.5e-05 22.0 17.9 1 18 607 624 607 625 0.98 10 13 2 1.3e+04 -12.1 17.1 3 18 661 681 658 682 0.78 11 13 1.3e-05 0.086 12.4 10.3 1 16 718 733 718 744 0.91 12 13 0.00044 2.9 7.6 13.8 4 18 753 769 751 770 0.86 13 13 0.19 1.2e+03 -0.9 0.8 7 12 785 790 779 790 0.70
Sequence Information
- Coding Sequence
- ATGGCAACGAGGGATGGAAATGCTTCTGCTGCAACTAGCGGTGGTGGCAGCCACAGTTTCGATGACTTTATATCCCAATTTAATGCCCGGGTACAAATACAGCAGCAACTACAGTACCACCTGCGATCGAACGCTCAGCTTCCGGAGCAACAGCAGCAGGATCCGGGAGCGTTCCAGTATTATGGCTTTACCTCCAACTTGACACCAACAGCTGCTGAGTTTGTGCCACGCAAATACCAAACGGAACCGAACGACGTTTCCCAATCATCAGTAGGACCTAACAATGCACGTGAAACGCACGCCAACACGATGCCGGATGACGATGGAGACGAACGCGAAAACATGCGGGCCGGACCCTCGAACCATTACGGTGGCGGAAGAAATGGCAACGTTCGTCAGCGTCGCAACGAGAGCCTAAAACCACGCAACGGATGGCATACGCGTGACGATCGTCCGGTAGGCCGAGCAGGTAAATGGAAAACCAACCAAACGACTGCCGGCAGTGGACGTCTCCGCTCACACGATGACGATTTTTCCGGCGATCATCAGCCCCCGAGCCGGGTAGGGGGTGAAAACTCTTCACGGCGTTCTGGCACGAGACAGTGGGGTAACCGTCCCACGATGCAACCAGACCCACCGAGCTCCGACGAAAAACGACCCAACGGGTCGTCCAAAGCGGAATCGTCAAAATCATCCCCATCGATAGTGCCACTGTCGAAGTGTTCCCAGCGTGAAAAACTTATGCGTGAGATCGAATGCTACCGGCTCGAGTGTCTGGTGTGCTGTGAAATCGTCAAACCGATGCAATCGATCTGGTCGTGTGGGAACTGTTACCATATCCTCCACCTCGGGTGCATCACCCGGTGGGCAACGAGTTCCCAGTCGGAGGACGGATCCGGGTGGCGCTGTCCGGCGTGTCAGCACGTGTCGAAAAAGATTCCCCGCGAGTACTTTTGCTTCTGTGGCAAACAGAAGAGCCCGACATACAATCGCGAGAATTTGGCTCACTCGTGTGGGAACCCATGCGGCAGGCGCGAGCTTTGCGATCACGCTTGTACGCTCCTATGCCATCCGGGACCGTGTCCACCGTGTCAGGCGTCCGTGCAGCGACGGTGCGGCTGTGGACGGTTGGAAAACCTGGTGCAGTGCTGCCAGAAGGAGAAGCTGCTGTGTGAGGCGACATGCGACAAGCCACTGAACTGTGCGCTCCACCGCTGCCAGAAGCTTTGCCACGGGGGAAGCTGTGAGGCGTGTGACGAACAGGTGCAACACAATTGCTACTGCGGCAAAAGCGACCGAATGGTGGAGTGTAGTGTGGAACATTTGGAAGTTACGCGGTACGGATGCGGGAAGGTGTGTGGATTACCGCTTGCCTGTGGCAATCATCAATGTGAGCGGTTGTGCCACGAGGGCGATTGTGATCAGTGTGCCGATGCTCCGAATCGCGTGCTTTCCTGTCCGTGTGGAAGAGAAGCGATCGAACCGGGAAGCCGAAAATCATGTCTCGATCCGATTCCGACTTGTTCGGGAGTTTGCGGACGCAGACTGACGTGCGGTCCAGCTGGAGCAAATCATTGCTGCGAGGCAAAGTGTCACCGGGGCGTGTGTCCACCGTGCCCAAAATCGACCACGGTCAAGTGCCGGTGCGGTGGCATGGATCAGCCGATGAAGTGTAAGGACCTGCGCACCCGGGCCGATGACGCTCGGTGCAAGAAACGGTGCGTGCGGCGACGCAGCTGCGCCAAGCACAAGTGTAACCAGGTGTGTTGTATCGATTTCGATCACATCTGTCCGAAGACGTGCTCGCTGCCGCTGCCCTGCGGACGACATCGCTGTGATAAACCCTGCCACAAGGGTAACTGTCGGCCGTGTCATCGAGTTTCGTTTGACGAGCTGACGTGCGACTGTGGTGCGAACATCATCTACCCGCCGGTGCCTTGCGGAACGAAAAAGCCGGCCTGTGATCGACCGTGCAGTCGGCAACATTCGTGCGAGCATCCGACATTGCACAATTGCCACGCGGAACCGGAATGTCCACCGTGCGTGGTGTTGACGAGCAAATACTGCTACGGAAAGCACGAGCAGCGTAAAACTATCCCGTGCTATCAGGAATCGTTTAGCTGTGGTATGCCTTGTGCGAAACCTCTACCCTGTGGTCGCCACAAGTGCATCCGAGCGTGCCACGAGGACGACTGTATGCAGGAGGGTGCGGTGGTTTGTAAGCAAAGCTGTACGACGATTCGGGAGATGTGTCCGCATCCGTGTAATGCACCGTGCCACGAGGGCGAGTGTCCGGACACGGCCTGTAAAATAGTGGTCGAAGTGACATGTGAGTGTGGCAATCGGAAGCAGCAGCGAACTTGTCACGACTTTTCGAAAGAATATCGTCGCATAGCAACGGCACAGCTTGCGTCGTCCGTACAGGAAATGCAGCTCGGCGGATCGGTCGAGCTGAGTGACATATTGGGCCCGATTCGTCCGAAGAACAACAAAACCCTGGAATGTAACGACGAATGCCGCAAGCTGGAGCGTAACCGGCGCCTCGCAATAGCCCTCCAGATCCGCAACCCAGACCTTCCGTCCAAATTGCACCCGAACTACTCGGAAACGTTGCGTGCCTATGCCAAGAAGGACCCGGCGCTAGTGCAGATGATCCACGAGAAGCTCACCGAGCTGGTGAAACTCGCCAAGGAGAGCAAACATAAGTCACGCTCGTACTCCTTCCCGGTGATGAACCGCGAGAAGCGTGGGATCGTGCAGGAAATGTGTCACATGTTTGGCGTCGAAGCGGTATCGTACGATGCCGAACCAAATCGTAACGTCGTCGCAACGGCGGAACGCGCTACGTCGTGGCTACCGAGCATGAGTCTGATGGAGGTACTGCAGCGAGAGAACGGACAACGGCGTATCGTTCTACCGAACCTGAACGCGTGGGGGAGAACGAGCTACGCGGGTGCCGCAACGAGCTCAACGAACGGCAAGTGA
- Protein Sequence
- MATRDGNASAATSGGGSHSFDDFISQFNARVQIQQQLQYHLRSNAQLPEQQQQDPGAFQYYGFTSNLTPTAAEFVPRKYQTEPNDVSQSSVGPNNARETHANTMPDDDGDERENMRAGPSNHYGGGRNGNVRQRRNESLKPRNGWHTRDDRPVGRAGKWKTNQTTAGSGRLRSHDDDFSGDHQPPSRVGGENSSRRSGTRQWGNRPTMQPDPPSSDEKRPNGSSKAESSKSSPSIVPLSKCSQREKLMREIECYRLECLVCCEIVKPMQSIWSCGNCYHILHLGCITRWATSSQSEDGSGWRCPACQHVSKKIPREYFCFCGKQKSPTYNRENLAHSCGNPCGRRELCDHACTLLCHPGPCPPCQASVQRRCGCGRLENLVQCCQKEKLLCEATCDKPLNCALHRCQKLCHGGSCEACDEQVQHNCYCGKSDRMVECSVEHLEVTRYGCGKVCGLPLACGNHQCERLCHEGDCDQCADAPNRVLSCPCGREAIEPGSRKSCLDPIPTCSGVCGRRLTCGPAGANHCCEAKCHRGVCPPCPKSTTVKCRCGGMDQPMKCKDLRTRADDARCKKRCVRRRSCAKHKCNQVCCIDFDHICPKTCSLPLPCGRHRCDKPCHKGNCRPCHRVSFDELTCDCGANIIYPPVPCGTKKPACDRPCSRQHSCEHPTLHNCHAEPECPPCVVLTSKYCYGKHEQRKTIPCYQESFSCGMPCAKPLPCGRHKCIRACHEDDCMQEGAVVCKQSCTTIREMCPHPCNAPCHEGECPDTACKIVVEVTCECGNRKQQRTCHDFSKEYRRIATAQLASSVQEMQLGGSVELSDILGPIRPKNNKTLECNDECRKLERNRRLAIALQIRNPDLPSKLHPNYSETLRAYAKKDPALVQMIHEKLTELVKLAKESKHKSRSYSFPVMNREKRGIVQEMCHMFGVEAVSYDAEPNRNVVATAERATSWLPSMSLMEVLQRENGQRRIVLPNLNAWGRTSYAGAATSSTNGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00095371;
- 90% Identity
- iTF_00103369;
- 80% Identity
- -