Acol012619.1
Basic Information
- Insect
- Anopheles coluzzii
- Gene Symbol
- stc
- Assembly
- GCA_016097175.1
- Location
- CM027930.1:15963881-15968011[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.7 1.2e+04 -3.9 1.6 15 19 245 249 244 249 0.81 2 16 0.062 4.4e+02 0.7 0.4 4 10 278 284 277 284 0.95 3 16 1.2e-06 0.0086 15.8 15.8 3 19 291 307 284 307 0.84 4 16 1.7 1.2e+04 -3.9 1.2 6 10 333 337 333 337 0.96 5 16 4.6e-07 0.0033 17.1 12.5 1 19 343 361 343 361 0.97 6 16 2 1.4e+04 -5.7 3.2 9 13 367 371 365 372 0.58 7 16 6.5e-10 4.6e-06 26.2 10.1 1 18 401 418 401 419 0.98 8 16 0.71 5.1e+03 -2.7 1.0 11 16 450 455 450 457 0.80 9 16 1.3e-05 0.095 12.4 17.3 1 19 460 482 460 482 0.89 10 16 0.0089 63 3.4 7.0 1 11 522 532 522 533 0.94 11 16 0.54 3.8e+03 -2.3 1.0 4 10 537 543 536 543 0.90 12 16 1.2e-08 8.8e-05 22.1 17.9 1 18 549 566 549 567 0.98 13 16 2 1.4e+04 -6.8 12.4 1 18 600 623 600 624 0.76 14 16 9.3e-07 0.0066 16.1 6.9 1 17 660 676 660 676 0.96 15 16 0.00027 1.9 8.3 13.2 4 18 696 712 694 713 0.86 16 16 0.18 1.3e+03 -0.8 0.8 7 12 728 733 722 733 0.70
Sequence Information
- Coding Sequence
- ATGGAAATAGTGGTGGTGGAGTTGCACCTCCACAAACGATGGTTTCGATGGCAACCACGATGCCTGCTGGTTCCGTCAGACCGGCTGCTGTTGCTGACAATGAGGATGATTATGATGGAGACGATCGGGAAAATATTCACCGTGCTGGATCGTCGAACCACTACGGCGGAGGTGGAGGAACTGGAGCAGGTGGTGGTGCAGGAGGAAGCAGATCGTCCGGCGGTGGACGTCCGCGGCGCAACGAAAGCCTTAAGCCACGCAACGGGTGGCACACGCGGGACGATCGGCCCGTCGCACGGCAGGGAAAGTGGAAAGCCAACCAGCAGACGGCCGGCAGTGGTCGGTTCCGGCCGCACGATGACGATTATGCCGCGGGCGATGTTCCACCCAGGAATGGCGAAACGAACTCCCGCCGCAATGGGCAGCGCCAGTGGGGCAACCGTACGATTCAGCCCGATCCGGACGAAAGGCGCACGAACGGCCAGTCGAAGGGTGCCGGTGCCGCTCCGCAACCGGAATCCCCGTCGGCCACACCGCTCTCCAAGTGCTCCGCAGCGCGAGAAGCTGATGCGCGAAATCGAATGCTACCGGCTGGAGTGTCTGGTGTGCTGCGAAATCGTGAAGCCAATGCAGTCGACCTGGTCCTGCGGCAACTGTTACCACATCCTGCATCTCGGGTGCGTTACCAAGTGGGCGACCAGCTCCCAGTCGGAGGATGGTTCCGGGTGGCGCTGTCCCGCCTGCCAGCACGTGTCGAAGAAGGTGCCGCGCGAATACTTTTGCTTCTGCGGCAAGCAGAAAAACCCGGCCTACAATCGGGAAGACTTGGCGCACTCGTGCGGCGAAGTGTGCGGCCGGCGGGACGTTTGCGAGCATGCCTGCACGCTGCTGTGCCATCCCGGCCCGTGCCCACCGTGCCAGGCGTCGGTGCAGCGCCGGTGTGGCTGTGGCCGGTTGGAAAAGACGGTCCAGTGCTGCCAGAAGGAGGAGCTGCTGTGTGAGGCGGTGTGCGAGAAGCCGCTAAACTGTGGGCTGCATCGGTGCGGCCGGCAGTGTCACGCAGGGAGCTGCGACACGTGCACGGAGCAGGTCCAGCACAGCTGCCACTGTGGCAAGGGTGAGCGGTCGGTGGTGTGCAGCGTGGAAAACCTGGCCGTCCAGCGGTACGGGTGCGGGAAGGCGTGCGACCGTCCGCTCGGCTGCGGCAACCATCGGTGCGCCCGGCTGTGCCACGAGGGCGAGTGTGAGGCGTGTGCGGACGCGCCGGACCGGGTACGGAGCTGTCCGTGCGGGCGGGAGCCGATCGTGCCGGGCAGTCGCCAATCGTGCCTCGACCCCGTGCCGACCTGCAGTGGGCCGTGCGGGCGGAAGCTGGCGTGCGGTCCGCCGGGCGCTAACCACTGCTGCGAGGCGGCGTGCCACCGGGGCGCCTGCCCGCCGTGCAAAAAGTCCACCACGGTCAAGTGCCGGTGCGGCGGCATGGATCAGCCGATGCGGTGCAAAGAGCTGACGACGCGCGCCGACGATGCGCGGTGCAAGAAGCGGTGCGTGCGGCGGCGCAGCTGCGCCAAGCACAAGTGCAACCAGGTGTGCTGCATCGACCTCGATCACATCTGTCCGAAGACGTGCTCGCTGCCGCTGTCCTGCGGCCGGCACCGGTGCGACAAGCCCTGCCACAAGGGCAACTGCCGGCCGTGCCATCGCGTGTCGTTCGACGAGCTGGCGTGCGACTGTGGCGCGAACGTGATCTATCCGCCGGTACCGTGCGGGACGCGCAAGCCGGCCTGCGATCGGCCGTGCGGCCGGAGGCACGCGTGCGACCATCCGGCGTTGCACAACTGTCACGCGGAGGCGGAGTGTCCGCCGTGCGTGGTGCTGACGACGAAGTACTGCCATGGTAGGCACGAGCAGCGCAAAACGATCCCGTGCTACCAGGAATCGTTCAGCTGCGGGATGCCGTGCGCAAAGCCGCTCGCCTGCGGCCGGCACAAGTGTATCCGGGCGTGCCACGAGGATGAGTGTGCGCCGGAGGGTGCGGCCGGTGTGTGCAAGCAGAGCTGTACGCGGACGCGCGAAGCCTGTCCGCATCCGTGCAATGCGCCGTGCCACGAGGGCGAGTGTCCGGACGTGGCGTGCAAGATTGTGGTGGAGGTCACGTGCGAGTGTGGCAATCGGAAGCAGCAGCGCACGTGTCACGATTTCTCCAAAGAGTACCGGCGCATAGCAACCGCCCAGCTTGCCTCGTCCGTGCAGGAGATGCAGCGCGGCGGCTCGGTGGAGCTGAGCGACATTCTGGGCCCGGTGCGACCGAAGAACAACAAAACACTAGAATGCAACGAAGAGTGCCGAATGCTGGAGCGCAACCGCCGGCTGGCGATAGCGCTGCAGATACGCAATCCCGACCTGCCGTCCAAGCTGCAGCCGAACTACTCGGAAACGTTGCGCGCGTACGCGAAGAAGGACCCGGCCCTGGTGCAGATGATACACGACAAGCTGACCGAGCTGGTGAAGCTGGCGAAGGAGAGCAAGCAAAAGTCCCGCTCCTACTCGTTCCCGGTGATGAACCGCGAGAAGCGTGCGATCGTGCACGAAATGTGTCACATGTTCGGGGTGGAATCGGTCGCGTACGATGCGGAACCGAATCGGAACGTCGTCGCGACGGCGGATCGCTTTACGTCCTGGCTGCCGAGCATGAGCCTGATGGAGGTGCTGCAGCGTGAGAACGGGCAACGGCGGATCGTGGTGCCGAGCTTAAATGCATGGGGCAAAACGACCTTGACCGGTGCGGCCGCAAGCTCGAGCAGCAAATGA
- Protein Sequence
- MEIVVVELHLHKRWFRWQPRCLLVPSDRLLLLTMRMIMMETIGKIFTVLDRRTTTAEVEELEQVVVQEEADRPAVDVRGATKALSHATGGTRGTIGPSHGRESGKPTSRRPAVVGSGRTMTIMPRAMFHPGMAKRTPAAMGSASGATVRFSPIRTKGARTASRRVPVPLRNRNPRRPHRSPSAPQREKLMREIECYRLECLVCCEIVKPMQSTWSCGNCYHILHLGCVTKWATSSQSEDGSGWRCPACQHVSKKVPREYFCFCGKQKNPAYNREDLAHSCGEVCGRRDVCEHACTLLCHPGPCPPCQASVQRRCGCGRLEKTVQCCQKEELLCEAVCEKPLNCGLHRCGRQCHAGSCDTCTEQVQHSCHCGKGERSVVCSVENLAVQRYGCGKACDRPLGCGNHRCARLCHEGECEACADAPDRVRSCPCGREPIVPGSRQSCLDPVPTCSGPCGRKLACGPPGANHCCEAACHRGACPPCKKSTTVKCRCGGMDQPMRCKELTTRADDARCKKRCVRRRSCAKHKCNQVCCIDLDHICPKTCSLPLSCGRHRCDKPCHKGNCRPCHRVSFDELACDCGANVIYPPVPCGTRKPACDRPCGRRHACDHPALHNCHAEAECPPCVVLTTKYCHGRHEQRKTIPCYQESFSCGMPCAKPLACGRHKCIRACHEDECAPEGAAGVCKQSCTRTREACPHPCNAPCHEGECPDVACKIVVEVTCECGNRKQQRTCHDFSKEYRRIATAQLASSVQEMQRGGSVELSDILGPVRPKNNKTLECNEECRMLERNRRLAIALQIRNPDLPSKLQPNYSETLRAYAKKDPALVQMIHDKLTELVKLAKESKQKSRSYSFPVMNREKRAIVHEMCHMFGVESVAYDAEPNRNVVATADRFTSWLPSMSLMEVLQRENGQRRIVVPSLNAWGKTTLTGAAASSSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00095371;
- 90% Identity
- -
- 80% Identity
- -