Adir000576.1
Basic Information
- Insect
- Anopheles dirus
- Gene Symbol
- stc
- Assembly
- GCA_000349145.1
- Location
- KB673090.1:6785820-6790122[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.9 1.1e+04 -4.0 1.6 15 19 306 310 305 310 0.81 2 14 0.02 1.2e+02 2.3 1.9 2 10 338 345 338 346 0.93 3 14 9e-06 0.055 13.0 17.0 3 19 352 368 351 368 0.93 4 14 8.4e-05 0.51 9.9 13.3 1 18 404 421 404 422 0.95 5 14 2 1.2e+04 -6.9 3.8 4 11 427 430 426 432 0.54 6 14 8.4e-11 5.1e-07 29.0 11.4 1 18 462 479 462 480 0.98 7 14 0.00035 2.1 7.9 19.3 1 19 521 543 515 543 0.90 8 14 0.0096 58 3.3 7.0 1 11 583 593 583 594 0.94 9 14 0.58 3.5e+03 -2.4 1.0 4 10 598 604 597 604 0.90 10 14 1.3e-08 8.1e-05 22.0 17.9 1 18 610 627 610 628 0.98 11 14 2 1.2e+04 -12.3 17.2 3 18 664 684 661 685 0.77 12 14 1.9e-08 0.00012 21.5 7.5 1 16 721 736 721 737 0.96 13 14 0.00052 3.2 7.3 14.2 4 18 757 773 755 774 0.85 14 14 0.52 3.2e+03 -2.2 0.7 7 12 789 794 783 794 0.68
Sequence Information
- Coding Sequence
- ATGGCAACGAGCGATGGAAATGCTTCCGCTGCGAccagcggtggtggcagcCACAGCTTCGACGACTTCATCTCTCAGTTCAACGCACGGGTGCAAATACAGCAGCAAATACAGTACCTGCGATCGAACGCGCAGCTtccggagcagcagccgcagcagcagcaggaaccggGCGCGTTCCAGTATTACGGCTTCACCTCCAACCTGACACCGACTGCCGCTGAGTTCGTTCCACGCAAGTACCAAACGGTGCCGAACGAATTCTCACATTCGTCGGCAGGGTCGAATGATGCACCGGAAACGTACGCCACCGTGACGCCACCGGACGACGATGGAGACGAACGTGAAAACATCCGCGCCGGACCGTCGAATCATTACGGCGGTGGCAGAAATGGCAGCATGCGTCCGCGTCGCAACGAAAGCCTGAAACCACGCAACGGATGGCACACGCGCGACGACCGTCCGGTGGGGCGTGCGAGTAAATGGAAGGCCAACCAAACGACGGCGGGCAGTGGACGTCTCCGTGCTCATGATGACGATTTTTCCGGTGACTATCAGCCGCCGGCCCGCACAAGCGCTGACAACGGTTCACGGCGTGCGGGCACGAGACAGTGGGGCAATCGGCCCACAATTCAACCCGACCCACCGACCCCCGACGAAAGACGCCCGAACGGGCCGTCCAGAGCGGAACCGCCGAAAACGTCCCCATCGATAACGCCCCTGTCGAAGTGTTCCCAGCGCGAGAAGCTGATGCGCGAGATCGAATGCTACCGGCTGGAGTGTCTGGTGTGCTGCGAGATCGTCAAGCCGATGCAATCGATCTGGTCGTGTGGCAACTGCTACCACATCCTGCACCTCGGGTGCGTTACCCGGTGGGCGACGAGCTCCCAGTCGGAGGACGGATCCGGGTGGCGCTGTCCGGCCTGCCAGCACGTGTCGAAGAAGATTCCCCGCGAGTACTTTTGCTTCTGCGGTAAGCAGAAGAACCCCACGTACAACCGCGAGTATCTGGGCCACACGTGCGGGGAAGTTTGTGGCAGGCGGGAGCTTTGCGAGCATCCGTGCACTCTGCTATGCCATCCGGGACCGTGCCCCCCGTGTCAGGCGTCCGTTCAGCGACGGTGTGGCTGTGGACGGTTGGAGAAGACGGTACAGTGCTGTCAGAAGGAGGAACTGCTGTGTGAGGCGACCTGTGACAAACCGCTGAACTGTGCGCTCCATCGGTGCGGGAAGCGTTGCCACGGCGGTGACTGTGAGACGTGTGGCGAGCAGGTGCAGCACAACTGCCACTGTGGCAAGAGTGACCGGATGGTGGAGTGTAGTGTGGAACATTTGGAGGTTACGCGGTACGGGTGTGGTAAGGCGTGCGGATTGCCGCTTACCTGTGGGAACCACCAGTGTGAGCGGTTGTGCCACGCCGGCGATTGTGATCCGTGTGCCGATGCGCCGAACCGTGTGCTGTCCTGTCCGTGTGGCCGGGAAGCGATCGAACCGGGAAGCCGAAAGTCGTGTCTCGACCCGATTCCGACCTGTTCTGGCGCCTGCGGGCGGAAGCTGACGTGCGGACCACCCGGGGCTAACCACTGCTGTGAGGCACAGTGCCACCGGGGCGTGTGTCCTCCGTGCCCGAAATCGACCACGGTGAAGTGCCGGTGCGGCGGCATGGACCAGCCGATGAAGTGTAAGGACCTGCGGACCAGGGCCGACGACGCGCGGTGCAAGAAGCGGTGCGTGCGGAGACGGAGCTGCGCCAAACACAAGTGCAACCAGGTGTGCTGCATCGATTTCGATCACATCTGCCCGAAGACGtgctcgctgccgctgccctGCGGACGACATCGCTGTGATAAGCCCTGCCACAAGGGCAACTGTCGGCCGTGTCATCGTGTTTCGTTCGACGAGCTGACGTGCGACTGCGGTGCGAACATCATCTACCCGCCGGTGCCCTGCGGGACGAAGAAACCGGCCTGCGACCGGCCGTGCAGTCGGCGGCACTCCTGTGAGCATCCGACGCTGCACAACTGCCACGCGGAACCCGAGTGTCCGCCGTGCGTGGTGCTGACGAGCAAGTACTGCCACGGGAAGCACGAGCAGCGCAAAACGATCCCGTGCCACCAGGAGTCGTTCAGCTGCGGAATGCCATGCGCGAAACCGCTCGCCTGTGGTCGCCACAAATGCATCCGAGCGTGCCATGACGGCGAGTGTATGCAGGAGGGTTCGGCGGCGATTTGCAAGCAAAACTGCACCACGGTACGAGAAGCGTGTCCGCATCCGTGCAATGCACCGTGTCACGAGGGCGAGTGTCCGGAAACGGCATGCAAAATTGCGGTGGAAGTGACATGCGAATGTGGAAACAGGAAGCAGCAGCGATCGTGTCACGATTTTTCCAAGGAGTATCGTCGCATAGCAACGGCCCAGCTTGCCTCGTCCGTGCAGGAAATGCAGCGTGGTGGCTCGGTCGAGCTGAGCGACATATTGAGGCCGATTCGTCCGAAGAACAATAAGACCCTGGAATGCACCGAAGAATGCCGGATGCTGGAGCGAAACCGGCGCCTGGCGATGGCCCTCCAAATCCGCAACCCAGACCTTCCGTCCAAGCTGCAGCCGAACTATTCGGAAACACTGCGCGCCTACGCCAAGAAGGACGCGGCGCTGGTGCAGATGATCCACGAGAAGCTCACCGAGCTGGTGAAGCTCGCCAAGGAGAGCAAACAGAAGTCGCGCTCGTACTCCTTTCCTGTGATGAACCGCGAGAAGCGTGCGATCGTGCAGGAAATGTGTCACATGTTTGGCGTCGAGGCGGTCGCGTACGATGCCGAACCGAATCGGAACATCGTCGCGACGGCGGATCGCGCTACGTCGTGGCTACCGAGCATGAGCCTGATGGAGGTGCTGCAGCGGGAGAACGGGCAACGGCGCATCGTTGTACCGAACCTGAATGCGTGGGGCAAAACGAGCTACGCGGGCGCGGCAACGAGCTCCACGAGCGGCAAGTGA
- Protein Sequence
- MATSDGNASAATSGGGSHSFDDFISQFNARVQIQQQIQYLRSNAQLPEQQPQQQQEPGAFQYYGFTSNLTPTAAEFVPRKYQTVPNEFSHSSAGSNDAPETYATVTPPDDDGDERENIRAGPSNHYGGGRNGSMRPRRNESLKPRNGWHTRDDRPVGRASKWKANQTTAGSGRLRAHDDDFSGDYQPPARTSADNGSRRAGTRQWGNRPTIQPDPPTPDERRPNGPSRAEPPKTSPSITPLSKCSQREKLMREIECYRLECLVCCEIVKPMQSIWSCGNCYHILHLGCVTRWATSSQSEDGSGWRCPACQHVSKKIPREYFCFCGKQKNPTYNREYLGHTCGEVCGRRELCEHPCTLLCHPGPCPPCQASVQRRCGCGRLEKTVQCCQKEELLCEATCDKPLNCALHRCGKRCHGGDCETCGEQVQHNCHCGKSDRMVECSVEHLEVTRYGCGKACGLPLTCGNHQCERLCHAGDCDPCADAPNRVLSCPCGREAIEPGSRKSCLDPIPTCSGACGRKLTCGPPGANHCCEAQCHRGVCPPCPKSTTVKCRCGGMDQPMKCKDLRTRADDARCKKRCVRRRSCAKHKCNQVCCIDFDHICPKTCSLPLPCGRHRCDKPCHKGNCRPCHRVSFDELTCDCGANIIYPPVPCGTKKPACDRPCSRRHSCEHPTLHNCHAEPECPPCVVLTSKYCHGKHEQRKTIPCHQESFSCGMPCAKPLACGRHKCIRACHDGECMQEGSAAICKQNCTTVREACPHPCNAPCHEGECPETACKIAVEVTCECGNRKQQRSCHDFSKEYRRIATAQLASSVQEMQRGGSVELSDILRPIRPKNNKTLECTEECRMLERNRRLAMALQIRNPDLPSKLQPNYSETLRAYAKKDAALVQMIHEKLTELVKLAKESKQKSRSYSFPVMNREKRAIVQEMCHMFGVEAVAYDAEPNRNIVATADRATSWLPSMSLMEVLQRENGQRRIVVPNLNAWGKTSYAGAATSSTSGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00095371;
- 90% Identity
- -
- 80% Identity
- -