Afun005855.1
Basic Information
- Insect
- Anopheles funestus
- Gene Symbol
- stc_1
- Assembly
- None
- Location
- Contig1:71258723-71262899[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.28 2.1e+03 -1.4 0.7 13 17 182 186 181 186 0.88 2 16 1.8 1.4e+04 -4.0 1.6 15 19 303 307 302 307 0.81 3 16 0.014 1.1e+02 2.7 0.2 4 10 336 342 335 343 0.96 4 16 1.5e-06 0.011 15.4 15.2 3 19 349 365 348 365 0.93 5 16 0.00017 1.2 8.9 5.2 1 18 401 418 401 419 0.95 6 16 2 1.5e+04 -6.9 3.8 4 11 424 427 423 429 0.54 7 16 1.9e-10 1.4e-06 28.0 13.3 1 18 459 476 459 477 0.98 8 16 0.0001 0.76 9.6 17.7 1 19 518 540 518 540 0.89 9 16 0.0095 70 3.3 7.0 1 11 580 590 580 591 0.94 10 16 0.57 4.2e+03 -2.4 1.0 4 10 595 601 594 601 0.90 11 16 1.3e-08 9.7e-05 22.0 17.9 1 18 607 624 607 625 0.98 12 16 0.56 4.1e+03 -2.3 0.8 6 10 654 658 653 658 0.89 13 16 2 1.5e+04 -6.0 9.5 10 18 672 681 661 682 0.78 14 16 7.5e-06 0.056 13.2 9.0 1 16 718 733 718 740 0.88 15 16 0.001 7.6 6.4 11.2 4 19 752 769 750 769 0.93 16 16 0.19 1.4e+03 -0.9 0.8 7 12 784 789 778 789 0.70
Sequence Information
- Coding Sequence
- ATGGCAACGAGCGATGGAAGTGCGGCTGCGGGCAGCAGTGGCAGCAGCAGCTTCGATGACTTCATCTCCCAGTTCAATGCTCGGGTCCAAATACAGCAGCAACTGCAATACCTCCGATCGAATCCCACCACTACCAATACCAACCAGCTGCAGGAACCGCAACAACCAACAACGTTTCAGTATTATGGCTTTACCTCCAATTTGACCCCAACTGCAGCCGAGTTTATCCCTCGCAAGTACCAAACGGAGGCGAACGATGGCGTACCACAAACGAACGTTTCGATGGCAACCACCACACTAGCGTCTGCTGCTGAGATGGATGACGATGATGATGCAGATGATAGGGAAAATATACGTGCAGGATCGTCGAATCACTACGGTGCCGGAAGATCTGCAAGCCGTCCGCGTAGAAACGAAACCCTGAAACCACGCAACGGTTGGCATACGAGAGACGACCGTCCCGTGGCTCGTCAGGGAAAGTGGAAATCCAACCAATCTACTGCCGGTAGTGGAAGGCTTCGGGTGCACGAGGATGATTATGCGGGCGATTGTCCTCCTTCACGCAACGGTGAAAACTCTTCACGACGTGCCGGAGCAAGACAGTGGGGTAATCGTACGATACAAACCGAAACTGATGAACGGCGTTCGAATGGTTCATCGTCGAAAACGGAAGCTAAACCACCGCCACCGGAATCACCAACAATAAAGCCACTGTCGAAGTGTTCCCAGCGCGAGAAGCTTATGCGCGAGATCGAATGCTATCGGCTGGAGTGTTTAGTGTGCTGTGAAATAGTCAAACCGATGCAATCGATCTGGTCGTGTGGCAACTGCTACCACATACTGCATCTTGCTTGCGTTACCAAGTGGGCGACGAGTTCACAGGCCGAGGATGGATCCGGTTGGCGCTGTCCGGCCTGTCAGCACGTCACGAAGAAGATTCCACGGGAGTATTTTTGTTTCTGCGGCAAGAAGAAAAATCCCACGTACAATCGGGAAGATTTAGCACACACCTGTGGGGAACTGTGCGGACGCCGTGAGCTTTGTGAGCACGCGTGCACACTGTTATGCCATCCCGGACCGTGCCCACCGTGTCAGGCATCGGTACAGCGAATGTGCGGTTGTGGACGATTGGCAAAATTGGTCCAGTGCTGTATGAAAGAGGAGCTGCTGTGTGATTCCGTGTGCGACAAACCACTGAACTGTGCGCTTCATCGTTGCGTGAAACGCTGCCACGCAGCAGCGTGCGAAGTGTGTGCGGAACAGGTCCAACATAACTGTCACTGCGGCAAAAGTGAACGGATGGTCGTATGTAGTGTGGAAAATCTGGAACAGATGAACTATGGATGTGGGAAAACGTGTGGTCTTCCGTTGGACTGTGGGAACCATCAGTGCCAACGGTTGTGTCACGAGGGTGAGTGTGATCCGTGTGCCGATGCACCCGAGCGCGTCCTCAGTTGTCCGTGCGGACGGAAAGTGATCGAACCGGGTAGCCGCAAATCGTGCCTCGATCCGATACCAACCTGTGCCGGCAGCTGTGGCCGTAAGCTGACGTGCGGTCCACCCGGTGCCAACCATTGCTGCGAGGCGCAGTGTCATCGGGGCGATTGTCCAACATGCAAAAAGTCGACCACCGTGAAGTGCCGTTGCGGGAACATGGATCAGCCAATGAAGTGCAAAGACCTGACGACACGTGCCGACGATGCCCGGTGCAAGAAGCGCTGTGTACGAAGACGCAGCTGCGCGAAGCACAAATGTAATCAGGTGTGCTGTATCGATATTGATCACATCTGTCCGAAAACCTGCTCGTTGCCGCTGTCCTGTGGACGCCACCGCTGTGATAAACCGTGCCACAAGGGTAACTGTCGGCCTTGTCATCGCGTTTCGTTCGACGAGCTGACCTGCGACTGTGGCGCTAACATAATCTATCCGCCCGTACCTTGCGGGACGAAAAAACCGGCCTGCGAACGGCCTTGCAATCGGAGGCATGCGTGCGACCATCCGGCCCTGCACAATTGTCACGCCGAACCGGAATGTCCACCGTGCGTCGTGCTGACGACGAAGTCATGTTACGGTAAGCACGAACAGCGTAAAACCATCCCGTGCTATCAGGAATCGTTTAGCTGCGGTATGCCTTGCGGGAAACCGCTCGCCTGCGGTCGACACAAATGTATCCGAGCATGCCATGAAGATGAATGCATGCAGGAGGGAACCGTTTGCAAACAGAACTGTACGAAAACGCGGGAAGCGTGCGTGCACGCGTGTAATGCACCTTGCCACGAGGACGAATGTCCCGATGTTCCGTGCAAGATTGTGGTCGAGGTGACCTGCGACTGTGGCAACCGTAAGCAGCAACGGACGTGTCACGATTTCTCCAAAGAGTACCGTCGCATAGCAACGTCGCAGCTTGCCTCGTCCGTGCAGGAAATGCAACGTGGCGGATCGGTCGAACTGAGCGACATTTTGGGACCCATTCGACCGAAAAATAATAAAACACTCGAGTGTAATGAAGAATGCAGACTGCTTGAGCGTAACCGCCGCATTGCGATAGCGCTACAGATACGCAATCCCGATCTACCGTCAAAATTGCAACCGAATTACTCCGAAACGTTGCGTGCGTACGCAAAGAAAGATCCCGCCCTGGTGCAGATGATACACGAAAAGCTAACCGAGCTGGTGAAGCTTGCGAAGGAAAGCAAACAAAAGTCACGCTCCTACTCGTTCCCGGTGATGAACCGCGAGAAGCGTGCCGTGGTGCACGAAATGTGTCACATGTTCGGTGTGGAATCGGTTGCATACGATGCGGAACCGAATCGGAATGTCGTCGCAACGGCGGATCGCTTTACGTCGTGGTTACCGAGCATGAGCCTGATGGAGGTACTGCAGCGAGAAAATGGCCAGCGCCGTATCATCGTACCGAGTCTGAATGCATGGGGTAGAACAAACTACGCTGGGGCAGCAAGTTCGAGCAGCAAATGA
- Protein Sequence
- MATSDGSAAAGSSGSSSFDDFISQFNARVQIQQQLQYLRSNPTTTNTNQLQEPQQPTTFQYYGFTSNLTPTAAEFIPRKYQTEANDGVPQTNVSMATTTLASAAEMDDDDDADDRENIRAGSSNHYGAGRSASRPRRNETLKPRNGWHTRDDRPVARQGKWKSNQSTAGSGRLRVHEDDYAGDCPPSRNGENSSRRAGARQWGNRTIQTETDERRSNGSSSKTEAKPPPPESPTIKPLSKCSQREKLMREIECYRLECLVCCEIVKPMQSIWSCGNCYHILHLACVTKWATSSQAEDGSGWRCPACQHVTKKIPREYFCFCGKKKNPTYNREDLAHTCGELCGRRELCEHACTLLCHPGPCPPCQASVQRMCGCGRLAKLVQCCMKEELLCDSVCDKPLNCALHRCVKRCHAAACEVCAEQVQHNCHCGKSERMVVCSVENLEQMNYGCGKTCGLPLDCGNHQCQRLCHEGECDPCADAPERVLSCPCGRKVIEPGSRKSCLDPIPTCAGSCGRKLTCGPPGANHCCEAQCHRGDCPTCKKSTTVKCRCGNMDQPMKCKDLTTRADDARCKKRCVRRRSCAKHKCNQVCCIDIDHICPKTCSLPLSCGRHRCDKPCHKGNCRPCHRVSFDELTCDCGANIIYPPVPCGTKKPACERPCNRRHACDHPALHNCHAEPECPPCVVLTTKSCYGKHEQRKTIPCYQESFSCGMPCGKPLACGRHKCIRACHEDECMQEGTVCKQNCTKTREACVHACNAPCHEDECPDVPCKIVVEVTCDCGNRKQQRTCHDFSKEYRRIATSQLASSVQEMQRGGSVELSDILGPIRPKNNKTLECNEECRLLERNRRIAIALQIRNPDLPSKLQPNYSETLRAYAKKDPALVQMIHEKLTELVKLAKESKQKSRSYSFPVMNREKRAVVHEMCHMFGVESVAYDAEPNRNVVATADRFTSWLPSMSLMEVLQRENGQRRIIVPSLNAWGRTNYAGAASSSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00095371;
- 90% Identity
- iTF_00105531;
- 80% Identity
- -