Agam001615.1
Basic Information
- Insect
- Anopheles gambiae
- Gene Symbol
- stc
- Assembly
- GCF_000005575.2
- Location
- NT:16160143-16163293[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.9 1.2e+04 -4.0 1.6 15 19 312 316 311 316 0.81 2 16 0.068 4.2e+02 0.6 0.4 4 10 345 351 344 351 0.95 3 16 1.3e-06 0.0083 15.6 15.8 3 19 358 374 351 374 0.84 4 16 1.8 1.1e+04 -4.0 1.2 6 10 400 404 400 404 0.96 5 16 5e-07 0.0031 17.0 12.5 1 19 410 428 410 428 0.97 6 16 2 1.2e+04 -5.8 3.2 9 13 434 438 432 439 0.58 7 16 7e-10 4.4e-06 26.1 10.1 1 18 468 485 468 486 0.98 8 16 1.1 6.8e+03 -3.3 1.5 11 16 517 522 517 523 0.77 9 16 1.4e-05 0.09 12.3 17.3 1 19 527 549 527 549 0.89 10 16 0.0096 60 3.3 7.0 1 11 589 599 589 600 0.94 11 16 0.58 3.6e+03 -2.4 1.0 4 10 604 610 603 610 0.90 12 16 1.3e-08 8.3e-05 22.0 17.9 1 18 616 633 616 634 0.98 13 16 2 1.2e+04 -6.7 12.2 1 18 667 690 667 691 0.76 14 16 1e-06 0.0062 16.0 6.9 1 17 727 743 727 743 0.96 15 16 0.00014 0.85 9.2 15.3 4 19 763 780 761 780 0.93 16 16 0.19 1.2e+03 -0.9 0.8 7 12 795 800 789 800 0.70
Sequence Information
- Coding Sequence
- agcagcaacaccttcGACGACTTCATTTCCCAGTTCAATGCACGGGTGCAGATACAGCAGCAATTGCAATACCTCCGGACGCATCataccaccaacaccaacgaacaccaccagcagcaaccggcAACGTTCCAGTATTATGGCTTTACCTCTAATCTGACCCCAACGGCGGCGGAGTTTGTCCCTCGTAAATACCAGACCGAAGCGAACGATGgaaatggtggtggtgcacctCCACAAACGATGGTTTCGATGGCAACCACGATGCCTGCTGGTTCCGTCAGaccggctgctgttgctgacaATGAGGATGATTATGATGGAGACGATCGCGAAAATATTCACCGTGCTGGATCGTCGAACCACTACGGCGGAGGTGGTGGTACTGGAGTAGGTGGTGCAGGAGGAAGCAGATCGTCCGGCGGTGGACGTCCGCGGCGCAACGAAAGCCTTAAGCCACGCAACGGGTGGCACACGCGGGACGATCGGCCCGTCGCACGGCAGGGAAAGTGGAAAGCCAACCAGCAGACGGCCGGCAGTGGTCGGTTCCGGCCGCACGATGACGATTATGCCGCGGGCGACGCTCCACCCAGGAATGGCGAAACGAACTCCCGCCGCAATGGGCAGCGCCAGTGGGGCAACCGTACGATTCAGCCCGATCCGGACGAAAGGCGCACGAACGGCCAGTCGAAGGGTGCCGGTGCAGCTCCGCAACCGGAATCCCCGTCGGCCACACCGCTCTCCAAGTGCTCCCAGCGCGAGAAGCTGATGCGCGAAATCGAATGCTACCGGCTGGAGTGTCTGGTGTGCTGCGAAATCGTGAAGCCAATGCAGTCGACCTGGTCCTGCGGCAACTGTTACCACATCCTGCACCTCGGGTGCGTTACCAAGTGGGCGACCAGCTCCCAGTCGGAGGATGGTTCCGGGTGGCGCTGTCCCGCCTGCCAGCACGTGTCGAAGAAGGTGCCGCGCGAATACTTTTGCTTCTGCGGCAAGCAGAAAAACCCGGCCTACAACCGGGAAGACTTGGCGCACTCGTGCGGCGAAGTGTGCGGCCGGCGGGACGTTTGCGAGCATGCCTGCACGCTGCTGTGCCATCCCGGCCCGTGCCCCCCGTGCCAGGCGTCGGTGCAGCGCCGGTGTGGCTGTGGCCGGTTGGAAAAGACGGtccagtgctgccagaagGAGGAGCTGCTGTGTGAGGCGGTGTGTGAGAAGCCGCTAAACTGTGGGCTGCATCGGTGTGGCCGGCAGTGTCACGCAGGGAGCTGCGACACGTGCACGGAGCAGGTCCAGCACAGCTGCCACTGTGGCAAGGGTGAGCGGTCGGTGGTGTGCAGTGTGGAAAACCTGGCCGTCCAGCGGTACGGGTGCGGGAAGGCGTGCGAACGTCCGCTCGGCTGCGGCAATCATCGGTGCGCCCGGCTGTGCCACGAGGGCGAGTGTGAGGCGTGTGCGGACGCGCCGGACCGGGTACGGAGCTGTCCGTGCGGGCGGGAGCCGATCGTGCCGGGCAGTCGCCAATCGTGCCTCGACCCCGTGCCGACCTGCAGTGGGCCGTGCGGGCGGAAGCTGGCGTGCGGTCCGCCGGGCGCTAACCACTGCTGCGAGGCGGCGTGCCACCGGGGCGCCTGCCCGCCGTGCAAAAAGTCCACCACGGTCAAGTGCCGGTGCGGCGGCATGGATCAGCCGATGCGGTGCAAAGAGCTGACGACGCGCGCCGACGATGCGCGGTGCAAGAAGCGGTGCGTGCGGCGGCGCAGCTGCGCCAAGCACAAGTGCAACCAGGTGTGCTGCATCGATCTCGATCACATCTGTCCGAAGACGTGCTCGCTGCCGCTGTCCTGCGGCCGGCACCGGTGCGACAAGCCCTGCCACAAGGGCAACTGCCGGCCGTGCCATCGCGTGTCGTTCGACGAGCTGGCGTGCGACTGTGGCGCGAACGTGATCTATCCGCCGGTACCGTGCGGGACGCGCAAGCCGGCCTGCGATCGGCCGTGCGGCCGGAGGCACGCGTGCGACCATCCGGCGTTGCACAACTGTCACGCGGAGGCGGAGTGTCCGCCGTGCGTGGTGCTGACGACGAAGTACTGCCATGGTAGGCACGAGCAGCGTAAAACGATCCCGTGCTACCAGGAATCGTTCAGCTGCGGGATGCCGTGCGCAAAGCCGCTCGCCTGCGGCCGCCACAAGTGTATCCGGGCGTGCCACGAGGATGAGTGTGCGCCGGAGGGTGCGGCCGGTGTGTGCAAGCAGAGCTGTACGCGGACGCGCGAAGCCTGTCCGCATCCGTGCAATGCGCCGTGCCACGAGGGCGAGTGTCCGGACGTGCCGTGCAAGATTGTGGTGGAGGTCACGTGCGAGTGTGGCAATCGCAAGCAGCAGCGCACGTGTCACGATTTCTCCAAAGAGTACCGGCGCATAGCAACCGCCCAGCTTGCCTCGTCCGTGCAGGAGATGCAGCGCGGCGGCTCGGTGGAGCTGAGCGACATTCTGGGCCCGGTGCGACcgaagaacaacaaaacACTAGAATGCAACGAAGAGTGCCGAATGCTGGAGCGCAACCGCCGGCTGGCGATAGCGCTGCAGATACGCAATCCCGACCTGCCGTCCAAGCTGCAGCCGAACTACTCGGAAACGTTGCGCGCGTACGCGAAGAAGGACCCGGCCCTGGTGCAGATGATACACGACAAGCTGACCGAGCTGGTGAAGCTGGCGAAGGAGAGCAAGCAAAAGTCCCGCTCCTACTCGTTCCCGGTGATGAACCGCGAGAAGCGTGCGATCGTGCACGAAATGTGTCACATGTTCGGGGTGGAATCGGTCGCGTACGATGCGGAACCGAATCGGAACGTCGTCGCGACAGCGGATCGCTTTACGTCCTGGCTGCCGAGCATGAGCCTGATGGAGGTGCTGCAGCGTGAGAACGGGCAACGGCGGATCGTGGTGCCGAGCTTAAATGCATGGGGCAAAACGACCTTGACCGGTGCGGCCGCAAGCTCGAGCAGCAAATGA
- Protein Sequence
- SSNTFDDFISQFNARVQIQQQLQYLRTHHTTNTNEHHQQQPATFQYYGFTSNLTPTAAEFVPRKYQTEANDGNGGGAPPQTMVSMATTMPAGSVRPAAVADNEDDYDGDDRENIHRAGSSNHYGGGGGTGVGGAGGSRSSGGGRPRRNESLKPRNGWHTRDDRPVARQGKWKANQQTAGSGRFRPHDDDYAAGDAPPRNGETNSRRNGQRQWGNRTIQPDPDERRTNGQSKGAGAAPQPESPSATPLSKCSQREKLMREIECYRLECLVCCEIVKPMQSTWSCGNCYHILHLGCVTKWATSSQSEDGSGWRCPACQHVSKKVPREYFCFCGKQKNPAYNREDLAHSCGEVCGRRDVCEHACTLLCHPGPCPPCQASVQRRCGCGRLEKTVQCCQKEELLCEAVCEKPLNCGLHRCGRQCHAGSCDTCTEQVQHSCHCGKGERSVVCSVENLAVQRYGCGKACERPLGCGNHRCARLCHEGECEACADAPDRVRSCPCGREPIVPGSRQSCLDPVPTCSGPCGRKLACGPPGANHCCEAACHRGACPPCKKSTTVKCRCGGMDQPMRCKELTTRADDARCKKRCVRRRSCAKHKCNQVCCIDLDHICPKTCSLPLSCGRHRCDKPCHKGNCRPCHRVSFDELACDCGANVIYPPVPCGTRKPACDRPCGRRHACDHPALHNCHAEAECPPCVVLTTKYCHGRHEQRKTIPCYQESFSCGMPCAKPLACGRHKCIRACHEDECAPEGAAGVCKQSCTRTREACPHPCNAPCHEGECPDVPCKIVVEVTCECGNRKQQRTCHDFSKEYRRIATAQLASSVQEMQRGGSVELSDILGPVRPKNNKTLECNEECRMLERNRRLAIALQIRNPDLPSKLQPNYSETLRAYAKKDPALVQMIHDKLTELVKLAKESKQKSRSYSFPVMNREKRAIVHEMCHMFGVESVAYDAEPNRNVVATADRFTSWLPSMSLMEVLQRENGQRRIVVPSLNAWGKTTLTGAAASSSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00095371;
- 90% Identity
- iTF_00093875;
- 80% Identity
- -