Amin004080.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anopheles minimus
Gene Symbol
stc
Assembly
GCA_000349025.1
Location
KB663644.1:1336469-1340394[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.24 1.5e+03 -1.2 0.9 12 17 184 189 184 189 0.90
2 16 1.9 1.2e+04 -4.0 1.6 15 19 307 311 306 311 0.81
3 16 0.16 1.1e+03 -0.6 0.4 4 10 340 346 339 347 0.94
4 16 4.3e-06 0.028 14.0 17.6 3 19 353 369 342 369 0.84
5 16 0.00033 2.1 8.0 5.3 1 18 405 422 405 423 0.94
6 16 2 1.3e+04 -6.9 3.8 4 11 428 431 427 433 0.54
7 16 2.2e-10 1.4e-06 27.7 12.4 1 18 463 480 463 481 0.98
8 16 3.3e-05 0.21 11.2 18.5 1 19 522 544 522 544 0.89
9 16 0.0095 61 3.3 7.0 1 11 584 594 584 595 0.94
10 16 0.58 3.7e+03 -2.4 1.0 4 10 599 605 598 605 0.90
11 16 1.3e-08 8.5e-05 22.0 17.9 1 18 611 628 611 629 0.98
12 16 0.56 3.6e+03 -2.3 0.8 6 10 658 662 657 662 0.89
13 16 2 1.3e+04 -6.5 10.6 4 18 666 685 665 686 0.68
14 16 4.2e-05 0.27 10.8 11.4 1 16 722 737 722 747 0.89
15 16 0.012 78 3.0 10.8 4 18 756 772 754 773 0.86
16 16 0.62 4e+03 -2.5 2.2 7 12 788 793 782 793 0.69

Sequence Information

Coding Sequence
ATGGCAACGAGCAACGGGAATGCAGCTGCtggcagcagcggcagcagcagcttcgATGATTTCATCTCCCAGTTCAATGCTCGGGTCCAAATACAGCAGCAACTGCAATACCTCCGATCGAATCCCACCACAAACACAGGCCAGCTGCAGGAACTGCAGCAACCGGCAACGTTCCAGTATTACGGATTTACCTCCAATCTTACCCCTACGGCAGCCGAATTTATCCCCCGCAAGTACCAAACGGAAACGAATAATGGCGTTCCATTAGCGACAATATCGATGGCAACCACCACACTGATGCCTGCCGCTGAGATGAatttcgatgatgatgatgatgatgtgaatGGTAGGGAAAACATGCGTGGTGGCCCATCGAATCATTACGGTGCTGGAAGATCTTCCGCAAGCCGTCCACGTAGAAACGAAAGCCTTAAACCGCGTAACGGATGGCATACGCGGGACGACCGTCCCGTGGGCCGgcagggaaaatggaaaccgaACCAAGCTACTGCCGGCAGTGGAAGGATCAGAGCGAACGAGAATGATTATTCGGGCGACTGCCCTCCACGGAACGGGGAAAGCTCCACGCGGCGTGCAGGAACAAGACAGTGGGGCAATCGAACGATACAATCCGAACCCGACGAAAGACGTTCAAATGGTTCAGCGGCCAAAGCGgaaaccaaaccaccaccaccaccccagGAATCGCCAACAATAAAGCCACTGTCCAAGTGTTCCCAGCGCGAGAAACTTATGCGTGAGATCGAATGCTACCGGCTGGAGTGTCTGGTGTGCTGCGAAATCGTTAAACCGATGCAATCGATCTGGTCCTGCGGAAACTGCTACCACATACTGCATCTGGCGTGCGTTACCAAGTGGGCTACCAGCTCACAGTCGGAGGATGGATCGGGCTGGCGCTGTCCGGCGTGTCAGCACGTCACGAAGAAGGTCCCCCGGGAGTACTTTTGTTTCTgtggcaaacagaaaaaccccACGTACAATCGGGAAGATTTGGCACACTCCTGTGGAGATGTATGCGGCCGTCGGGAACTTTGCGAGCACGCGTGTACGCTTCTGTGCCATCCTGGGCCGTGCCCACCATGTCAGGCTTCGGTACAGCGAATGTGTGGGTGCGGCCGGTTGTCCAAACCGGTCCAGTGTTGCCAGAAGGAAGAACTGGTTTGTGGTTCGGTGTGCGATAAACCATTGAACTGTGCGCTTCATCGTTGCGTGCAACGTTGCCACGCTGCGGCGTGTGAAATCTGCGCGGAACAGGTGCAGCATAACTGTCACTGCGGTAAGGCTGAACGGTTGGTTGCGTGTAGCGTGGAAAATCTGAAACAAACCCGATATGGGTGTGGGAAAACGTGTGGCCTACCGTTGGGCTGTGGAAACCATCAATGTCAGCGGTTGTGTCACGCGGGCGAGTGTGACCCGTGTGCGGATGCGCCCGAGCGTGTCCTCAGCTGTCCGTGCGGACGGGAAGCAATCGAACCGGGTAGCCGTAAATCATGTCTCGATCCGATACCGACCTGTGCCGGCAGCTGTGGCCGCAAGCTAAAGTGCGGCCCGCCCGGTGCAAACCACTGTTGCGAGGCGCAATGTCATCGGGGTGATTGTCCACCGTGCAAAAAGTCCACCACCGTTAAGTGCCGTTGCGGGAGCATGGATCAACCGATGAAGTGCAAAGACCTGACGACCCGTGCCGATGATGCACGTTGCAAAAAGCGGTGCGTGCGAAGGCGCAGCTGCGCGAAACACAAGTGTAATCAGGTGTGCTGTATCGATTTCGACCACATCTGTCCGAAAACCTGCTCGCTGCCGCTGTCCTGTGGACGGCATCGCTGTGATAAACCGTGCCACAAGGGTAACTGTCGGCCCTGTCATCGCGTTTCGTTCGACGAGTTGACCTGTGACTGTGGGGCGAATGTTATCTATCCGCCCGTACCCTGCGGGACAAAGAAACCGGCCTGTGAGCGACCGTGCAACCGTCGGCATGCGTGCGAACATCCGGCCCTGCACAATTGTCACGCCGAACCGGAATGTCCACCGTGCGTTGTGCTGACAACCAAATCCTGTTACGGAAAGCACGAACAGCGCAAAACCATCCCGTGCTATCAGGAATCGTTTAGCTGCGGCATGCCATGCGGTAAACCGCTTGCCTGTGGTCGACACAAATGCATCAGAGCATGCCACGAAGATGAATGCATGCAGGAAGGTGCCGTTTGTAAACAGAGCTGCACAAAAGTGCGGGAAGCGTGCGTGCATCCGTGCAATGCGCCCTGCCACGAGGACGAATGTCCCGATGTGGCGTGCAAGATTATGGTAGAGGTATCGTGTGAGTGTGGCCACCGGAAGCAGCAACGTACGTGTCACGATTTCTCCCAAGAGTACCGTCGCATAGCAACGACCCAGCTCGCTTCGTCCGTCCAGGAAATGCAACGTGGAGGATCGGTCGAACTGAGCGACATTTTGGGACCGATCCGgccgaaaaacaacaaaacACTGGAGTGCAATGATGAATGCCGCCTGCTTGAACGTAACCGACGTATTGCGATTGCACTACAGATCCGCAACCCGGATCTACCGTCGAAACTGCAACCGAACTACTCCGAAACGTTGCGTGCGTACGCAAAGAAAGATCCTGCCCTGGTGCAGATGATACACGAAAAATTAACCGAACTGGTGAAGCTGGccaaggaaagcaaacaaaagtcaCGCTCCTACTCGTTCCCGATTATGAACCGTGAGAAGCGCGATGTGGTGCACGAGATGTGCCACATGTTCGGTGTCGAAGCGGTTGCATACGATGCGGAACCGAATCGGAACGTGGTCGCAACAGCGGATCGTCTGACGTCGTGGTTACCGAGCATGAGCCTAATGGAGGTACTGCAACGTGAAAATGGTCAGCGCCGTATCGTCGTACCGAGTCTGAATGCATGGGGTAGAACGAACTACGCTGGTGCGGCAAGTTCAACCAGCAAATGA
Protein Sequence
MATSNGNAAAGSSGSSSFDDFISQFNARVQIQQQLQYLRSNPTTNTGQLQELQQPATFQYYGFTSNLTPTAAEFIPRKYQTETNNGVPLATISMATTTLMPAAEMNFDDDDDDVNGRENMRGGPSNHYGAGRSSASRPRRNESLKPRNGWHTRDDRPVGRQGKWKPNQATAGSGRIRANENDYSGDCPPRNGESSTRRAGTRQWGNRTIQSEPDERRSNGSAAKAETKPPPPPQESPTIKPLSKCSQREKLMREIECYRLECLVCCEIVKPMQSIWSCGNCYHILHLACVTKWATSSQSEDGSGWRCPACQHVTKKVPREYFCFCGKQKNPTYNREDLAHSCGDVCGRRELCEHACTLLCHPGPCPPCQASVQRMCGCGRLSKPVQCCQKEELVCGSVCDKPLNCALHRCVQRCHAAACEICAEQVQHNCHCGKAERLVACSVENLKQTRYGCGKTCGLPLGCGNHQCQRLCHAGECDPCADAPERVLSCPCGREAIEPGSRKSCLDPIPTCAGSCGRKLKCGPPGANHCCEAQCHRGDCPPCKKSTTVKCRCGSMDQPMKCKDLTTRADDARCKKRCVRRRSCAKHKCNQVCCIDFDHICPKTCSLPLSCGRHRCDKPCHKGNCRPCHRVSFDELTCDCGANVIYPPVPCGTKKPACERPCNRRHACEHPALHNCHAEPECPPCVVLTTKSCYGKHEQRKTIPCYQESFSCGMPCGKPLACGRHKCIRACHEDECMQEGAVCKQSCTKVREACVHPCNAPCHEDECPDVACKIMVEVSCECGHRKQQRTCHDFSQEYRRIATTQLASSVQEMQRGGSVELSDILGPIRPKNNKTLECNDECRLLERNRRIAIALQIRNPDLPSKLQPNYSETLRAYAKKDPALVQMIHEKLTELVKLAKESKQKSRSYSFPIMNREKRDVVHEMCHMFGVEAVAYDAEPNRNVVATADRLTSWLPSMSLMEVLQRENGQRRIVVPSLNAWGRTNYAGAASSTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00095371;
90% Identity
iTF_00098185; iTF_00102078;
80% Identity
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