Aste006616.1
Basic Information
- Insect
- Anopheles stephensi
- Gene Symbol
- stc
- Assembly
- GCA_013141755.1
- Location
- CM023249.1:66768171-66772040[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.9 1.4e+04 -4.0 1.6 15 19 304 308 303 308 0.81 2 13 7.9e-05 0.6 10.0 20.0 3 19 350 366 336 366 0.86 3 13 4.4e-06 0.034 14.0 7.8 1 18 402 419 402 420 0.95 4 13 7.9e-11 6e-07 29.1 13.6 1 18 460 477 460 478 0.98 5 13 0.028 2.1e+02 1.8 22.7 3 19 525 541 513 541 0.87 6 13 0.0095 73 3.3 7.0 1 11 581 591 581 592 0.94 7 13 0.57 4.4e+03 -2.4 1.0 4 10 596 602 595 602 0.90 8 13 1.5e-09 1.1e-05 25.0 16.5 1 19 608 626 608 626 0.99 9 13 1.4 1.1e+04 -3.6 0.5 6 10 655 659 654 659 0.80 10 13 2 1.5e+04 -6.1 9.6 10 18 673 682 662 683 0.78 11 13 1.7e-05 0.13 12.1 12.5 1 17 719 735 719 744 0.94 12 13 0.016 1.2e+02 2.6 13.9 4 19 753 770 751 770 0.92 13 13 0.19 1.5e+03 -0.9 0.8 7 12 785 790 779 790 0.70
Sequence Information
- Coding Sequence
- ATGGCAACGAGCGATGGCAATGCTGCACCGGGCGGTGGCAGTAGTGGCAGCGCCAGCTTTGATGATTTCATTTCCCAGTTCAATGCACGGGTCCAAATACAGCAGCAACTGCAATACCTCCGATCGAATCCCACCGGCACTACCGACCAGGAACCGTCGAACCAGCCAACGTTCCAGTATTATGGCTTTACCTCCAACCTAACTCCAACGGCGGCCGAATTTATCCCACGCAAGTACCAAACGGAAGCGGCAACAAACGATGGCGTCACTACCGCGCAACCGACGACAGTTTCGATGGCAACCACTTCTACACTTCTCGCGCCTGCCGAGATGGAtcgcgatgatgatgctgatgatagGGAAAATGTGCGTGCCGGACCATCGAATCACTACGGCGCGGGCAGATCTTCGGCGGGCCGGCCACGTAGAAACGAGAGCCTTAAACCACGCAACGGTTGGCATACGCGAGACGACCGGCCCGTGGGTCGTccgggaaaatggaaatctaACCAAGCTACTGCCGGAAGTGGGCGTGTACGGGTGCACGATACAGATGAGTATGCGGGCGATGGTCCACCCCGGAACGGTGACCACTCGTCCCGGCGTACCGGGACAAGACAGTGGGGTGGAAATCGTACGATACCAGCCGAACCGGACGAGCGGCGTTCGAATGGGGCGCACAAACCGGCGGAATCATCCCCGGCGATAAAGCCACTGTCCAAGTGTTCCCAGCGTGAAAAGCTTATGCGCGAAATCGAATGCTACCGGCTGGAGTGTCTAGTGTGCTGTGAAATAGTGAAACCGATGCAATCGATCTGGTCCTGTGGCAATTGCTATCACATACTGCATCTCGCTTGCGTGACCAGGTGGGCTACGAGCTCGCAGGCGGAGGATGGTTCGGGGTGGCGCTGTCCCGCCTGCCAGCACGTAACGAAGAAGATCCCGCGCGAGTATCACTGTTTCTGTGGGAAGATGAAAAATCCGGCCTACAATCGGGAGGATTTGGCACACTCGTGCGGTAAGCTGTGTGGCCGGCGTGAGATTTGTGAGCACGCGTGTGGGCTGCTGTGTCATCCCGGGCCGTGTCCACCGTGTCAGGCCTCGGTACAGCGTCGGTGTGGCTGTGGACGGTTGGCAAAGCTGGTGCAGTGCTGCCAGAAGGATGAGCTGTTGTGTGATGCCGTTTGCGATAAGCCACTAAACTGTGCGTTGCATCGGTGCGTGAAACGTTGCCACGCTGGGGAATGCGAGGCGTGTGCGGAACAGGTCCAGCATAACTGTTACTGTGGCAAAAGCGAACGGATGGTGGCCTGTAGCGTGGCAAACCTGGAGCGAACCCGGTACGGGTgtggaaaaaaatgtgaaGTTCCGTTATCGTGCGGCAATCACAAGTGTCAGCGGCTGTGCCACGAGGGCGAATGTGAACCGTGTGCCGATGCACCGAACCGCGTGCTCAGCTGCCCGTGTGGGCGGGAAGCGATCGAACCGGGAAGCCGTCAATCCTGCCTCGACCCGATACCGACCTGCACCGGAAACTGTGGCCGCAAGCTGTCGTGTGGTCCACCCGGTGCAGCCCATTGCTGTGAGGCGCAGTGCCATCCGGGCGGGTGTCCACCGTGCAAAAAGTCCACCACGGTCAAGTGCCGCTGCGGCAGCATGGATCAGCCGATGAAGTGCAAGGACCTGACGACGCGTGCGGACGATGCGCGGTGCAAGAAGCGGTGCGTGCGAAGGCGCAGCTGTGCGAAACACAAATGCAACCAGGTGTGCTGCATCGATTTCGATCACATCTGTCCGAAAACCTGCTCGCTGCCGCTGTCCTGTGGACGGCATCGCTGTGATAAGCCCTGCCACAAGGGCAATTGTCGGCCGTGTCCGCGCGTTTCGTTCGACGAGCTTACGTGTGACTGTGGGGCCAACGTGATCTATCCGCCCGTACCCTGCGGCACCAAGAAACCTGCCTGTGATCGGCCGTGCAATCGGCGGCATGTGTGTGAACATCCGGCACTGCACAACTGTCACGCCGAACCGGAATGTCCGCCGTGTGTGGTGCTGACGACGAAGTACTGCTACGGTAAGCACGAGCAGCGTAAAACCATCCCCTGCTATCAGGAATCGTTTAGCTGCGGGATGCCCTGTGCGAAGCCGCTCGTGTGCGGTCGGCATAAATGCATTAGAACGTGCCATGAAGATGAGTGCGCACCGGAAGGTACCGTCTGCAAGCAAAGCTGCACGAAGACGCGGGAAACGTGCGTTCATCCGTGTAATGCACCGTGCCACGAGGAGGAATGCCCGGACACACCGTGCAAGATTATGGTCGAAGTAACGTGTGAGTGTGGCAATCGGAAGCAGCAACGCACGTGTCACGATTTCGCCAAAGAGTACCGTCGCATAGCAACCGCCCAGCTCGCCTCGTCCGTGCAGGAAATGCAGCGTGGTGGATCGGTCGAGCTGAGCGACATTCTTGGACCGGCTCGACCGAAATCCAACAAAACACTGGAGTGTACTGAAGAATGCCGACTGCTGGAACGTAACCGCCGTCTTGCGATCGCACTGCAGATCCGTAATCCCGATCTGCCGTCGAAGCTGCAGCCAAACTATTCCGAAACGTTGCGTGCCTATGCAAAGAAAGATCCGGCCTTGGTGAAGATGATACACGACAAGCTCACCGAGCTGGTGAAGCTGgcgaaggaaagcaaacaaaagtcACGGTCCTATTCGTTCCCGGTCATGAACCGTGAGAAGCGTGCGATAGTGCACGAAATGTGTCACATGTTTGGCGTCGAATCGGTTGCGTACGATGCGGAACCGAATCGGAATGTGGTCGCTACGGCGGACCGACTGACGTCGTGGTTACCGAGCATGAGCCTAATGGAGGTCCTGCAGCGTGAGAATGGCCAGCGCCGTATCATTGTGCCGAACCTGAATGCTTGGGGTCGTACGAACTACGCTGGTGCGGCAAGTTCGAGCAGCAAGTGA
- Protein Sequence
- MATSDGNAAPGGGSSGSASFDDFISQFNARVQIQQQLQYLRSNPTGTTDQEPSNQPTFQYYGFTSNLTPTAAEFIPRKYQTEAATNDGVTTAQPTTVSMATTSTLLAPAEMDRDDDADDRENVRAGPSNHYGAGRSSAGRPRRNESLKPRNGWHTRDDRPVGRPGKWKSNQATAGSGRVRVHDTDEYAGDGPPRNGDHSSRRTGTRQWGGNRTIPAEPDERRSNGAHKPAESSPAIKPLSKCSQREKLMREIECYRLECLVCCEIVKPMQSIWSCGNCYHILHLACVTRWATSSQAEDGSGWRCPACQHVTKKIPREYHCFCGKMKNPAYNREDLAHSCGKLCGRREICEHACGLLCHPGPCPPCQASVQRRCGCGRLAKLVQCCQKDELLCDAVCDKPLNCALHRCVKRCHAGECEACAEQVQHNCYCGKSERMVACSVANLERTRYGCGKKCEVPLSCGNHKCQRLCHEGECEPCADAPNRVLSCPCGREAIEPGSRQSCLDPIPTCTGNCGRKLSCGPPGAAHCCEAQCHPGGCPPCKKSTTVKCRCGSMDQPMKCKDLTTRADDARCKKRCVRRRSCAKHKCNQVCCIDFDHICPKTCSLPLSCGRHRCDKPCHKGNCRPCPRVSFDELTCDCGANVIYPPVPCGTKKPACDRPCNRRHVCEHPALHNCHAEPECPPCVVLTTKYCYGKHEQRKTIPCYQESFSCGMPCAKPLVCGRHKCIRTCHEDECAPEGTVCKQSCTKTRETCVHPCNAPCHEEECPDTPCKIMVEVTCECGNRKQQRTCHDFAKEYRRIATAQLASSVQEMQRGGSVELSDILGPARPKSNKTLECTEECRLLERNRRLAIALQIRNPDLPSKLQPNYSETLRAYAKKDPALVKMIHDKLTELVKLAKESKQKSRSYSFPVMNREKRAIVHEMCHMFGVESVAYDAEPNRNVVATADRLTSWLPSMSLMEVLQRENGQRRIIVPNLNAWGRTNYAGAASSSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00095371;
- 90% Identity
- -
- 80% Identity
- -