Aara010038.1
Basic Information
- Insect
- Anopheles arabiensis
- Gene Symbol
- stc
- Assembly
- GCA_016920715.1
- Location
- NC:15957863-15962493[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.9 1.2e+04 -4.1 1.6 15 19 335 339 334 339 0.81 2 16 0.071 4.3e+02 0.5 0.5 4 10 368 374 367 375 0.95 3 16 1.4e-06 0.0084 15.6 15.8 3 19 381 397 374 397 0.84 4 16 1.9 1.2e+04 -4.0 1.2 6 10 423 427 423 427 0.96 5 16 5e-08 0.00031 20.2 10.8 1 19 433 451 433 451 0.97 6 16 2 1.2e+04 -5.8 3.2 9 13 457 461 455 462 0.58 7 16 7.2e-10 4.4e-06 26.1 10.1 1 18 491 508 491 509 0.98 8 16 1.1 6.8e+03 -3.3 1.5 11 16 540 545 540 546 0.77 9 16 1.5e-05 0.09 12.3 17.3 1 19 550 572 550 572 0.89 10 16 0.0098 60 3.3 7.0 1 11 612 622 612 623 0.94 11 16 0.59 3.6e+03 -2.4 1.0 4 10 627 633 626 633 0.90 12 16 1.4e-08 8.3e-05 22.0 17.9 1 18 639 656 639 657 0.98 13 16 2 1.2e+04 -6.8 12.2 1 18 690 713 690 714 0.76 14 16 1e-06 0.0063 16.0 6.9 1 17 750 766 750 766 0.96 15 16 0.00029 1.8 8.1 13.2 4 18 786 802 784 803 0.86 16 16 0.2 1.2e+03 -0.9 0.8 7 12 818 823 812 823 0.70
Sequence Information
- Coding Sequence
- ATGGCAACGAGCGATGGAAATGCGGCCAGCAGtggaagcaacagcagtaaCACCTTCGACGACTTCATTTCCCAGTTCAATGCACGGGTGCAGATACagcagcaattgcaatacCTCCGGACGCATCataccaccaacaacaacgaccaccagcagcagcaaccggcaACGTTCCAGTATTATGGCTTTACCTCCAATCTGACCCCAACGGCGGCGGAGTTTGTCCCCCGTAAGTACCAGACCGAAGCGAATGATGGAAATAGtggggctggtggtggtggtggaggtgcaCTTCCACAAACGATGGTTTCAATGGCAACCACGATGCCTGCTGGTTCCGCCAGaccggctgctgttgctgacaATGAGGATGATTATGATGGAGACGATCGGGAAAATAGTCACCGTGCTGGATCGACAAACCACTACGGAGGAGCTGGAGGAACTGGAGGAGGTGGTGCAGGAGGAAGCAGATCGTCCGGCGGTGGTCGTCCGCGGCGCAACGAAAGCCTTAAGCCACGCAACGGGTGGCACACGCGGGACGATCGGCCCGTCGCACGGCAGGGAAAGTGGAAAGCCAACCTGCAGACGGCCGGCAGTGGTCGGTTCCGGCCGCACGATGACGATTATACCGTGGGCGATGTTCCACCCAGAAATGGCGAAACGAACTCCCGCCGCAATGGGCAGCGCCAGTGGGGCAACCGTACGATTCAGCCCGATCGAAGCCCGATCGACGAAAGGCGCACGAACGGCCAGTCGAAGGGTGCCGGTGCCGCTCCGCAACCGGAATCCCCGTCGGCCACACCGCTCTCCAAGTGCTCCCAGCGCGAGAAGCTGATGCGCGAAATCGAATGCTACCGGCTGGAGTGTCTGGTGTGCTGCGAAATCGTGAAGCCAATGCAGTCGACCTGGTCCTGCGGCAACTGTTACCACATCCTGCACCTCGGGTGCGTTACCAAGTGGGCGACCAGCTCCCAGTCGGAGGATGGTTCCGGGTGGCGCTGTCCCGCCTGCCAGCACGTGTCGAAGAAGGTGCCGCGCGAATACTTTTGCTTCTGCGGCAAGCAGAAAAACCCGGCCTACAACCGGGAGGACTTGGCGCACTCGTGCGGCGAAGTGTGCGGCCGGCGGGACGTTTGCGAGCATGCCTGCACGCTGCTGTGCCATCCCGGCCCGTGCCCACCGTGCCAGGCGTCGGTGCAGCGCCGGTGTGGCTGTGGCCGGTTGGAAAAGACGGTCCAGTGCTGCCAGAAGGAGGAGCTGCTGTGTGAGGCGGTGTGCGAGAAGCCGCTAAACTGTGGGCTGCATCGGTGCGACCGGCAGTGTCACGCAGGGAGCTGCGACACGTGCACGGAGCAGGTCCAGCACAGCTGCCACTGTGGCAAGGGTGAGCGGTCGGTGGTGTGCAGCGTGGAAAACCTGGCCGTCCAGCGGTACGGGTGCGGGAAGGCGTGCGAACGTCCGCTCGGCTGCGGCAATCATCGGTGCGCCCGGCTGTGCCACGAGGGCGAGTGTGAGGCGTGTGCGGACGCGCCGGACCGGGTACGGAGCTGTCCGTGCGGGCGGGAGCCGATCGTGCCGGGCAGTCGCCAATCGTGCCTCGACCCCGTGCCGACCTGCAGTGGGCCGTGCGGGCGGAAGCTGGCGTGCGGTCCGCCGGGCGCTAACCACTGCTGCGAGGCGGCGTGCCACCGGGGCGCCTGCCCGCCGTGCAAAAAGTCCACCACGGTTAAGTGCCGGTGCGGCAGCATGGATCAGCCGATGCGGTGTAAAGAGCTGACGACGCGCGCCGACGATGCGCGGTGCAAGAAGCGGTGCGTGCGGCGGCGCAGCTGCGCCAAGCACAAGTGCAACCAGGTGTGCTGCATCGACTTCGATCACATCTGTCCGAAGACGTGCTCGCTGCCGCTGTCCTGCGGCCGGCACCGGTGCGACAAGCCCTGCCACAAGGGCAACTGCCGGCCGTGCCATCGCGTGTCGTTCGACGAGCTGGCGTGCGACTGTGGCGCGAACGTGATTTATCCGCCGGTACCGTGCGGGACGCGCAAGCCGGCCTGCGATCGGCCGTGCGGCCGGAGGCACGCGTGCGACCATCCGGCCCTGCACAACTGTCACGCGGAGGCGGAGTGTCCGCCGTGCGTGGTGCTGACGACGAAGTACTGCCATGGTAGGCACGAGCAGCGCAAAACGATCCCGTGCTATCAGGAATCGTTCAGCTGCGGGATGCCGTGCGCAAAGCCGCTCACCTGCGGCCGGCACAAGTGTATCCGGGCGTGCCACGAGGATGAGTGTGCGCCGGAGGGTGCGGCCGGTGTGTGCAAGCAGAGCTGTACGCGGACGCGCGAAGCCTGTCCGCATCCGTGCAATGCGCCGTGCCACGAGGGCGAGTGTCCGGACGTGGCGTGCAAGATTGTGGTGGAGGTCACGTGCGAGTGTGGCAATCGCAAGCAGCAGCGCACGTGTCACGATTTCTCCAAAGAGTACCGGCGCATAGCAACCGCCCAGCTTGCCTCGTCCGTGCAGGAGATGCAGCGCGGCGGCTCGGTGGAGCTCAGCGACATTCTGGGCCCGGTGCGACCgaagaacaacaaaacACTAGAATGCAACGAAGAGTGCCGAATGCTGGAGCGCAACCGCCGGCTGGCGATAGCGCTGCAGATACGCAATCCCGACCTGCCGTCCAAGCTGCAGCCGAACTACTCGGAAACGTTGCGCGCGTACGCGAAGAAGGACCCGGCCCTGGTGCAGATGATACACGACAAGCTGACCGAGCTGGTGAAGCTGGCGAAGGAGAGCAAGCAAAAATCCCGCTCCTACTCGTTCCCGGTGATGAACCGCGAGAAGCGTGCGATCGTGCACGAAATGTGTCACATGTTCGGGGTGGAGTCGGTCGCGTACGATGCGGAACCGAATCGGAACGTCGTCGCGACGGCGGATCGCTTTACGTCCTGGCTGCCGAGCATGAGCCTGATGGAGGTGCTGCAGCGTGAGAACGGGCAGCGCCGGATCGTGGTGCCGAGCTTAAATGCATGGGGCAAAACGACCTTGACCGGCGCGGCTGCTAGCTCGAGCAGCAAATGA
- Protein Sequence
- MATSDGNAASSGSNSSNTFDDFISQFNARVQIQQQLQYLRTHHTTNNNDHQQQQPATFQYYGFTSNLTPTAAEFVPRKYQTEANDGNSGAGGGGGGALPQTMVSMATTMPAGSARPAAVADNEDDYDGDDRENSHRAGSTNHYGGAGGTGGGGAGGSRSSGGGRPRRNESLKPRNGWHTRDDRPVARQGKWKANLQTAGSGRFRPHDDDYTVGDVPPRNGETNSRRNGQRQWGNRTIQPDRSPIDERRTNGQSKGAGAAPQPESPSATPLSKCSQREKLMREIECYRLECLVCCEIVKPMQSTWSCGNCYHILHLGCVTKWATSSQSEDGSGWRCPACQHVSKKVPREYFCFCGKQKNPAYNREDLAHSCGEVCGRRDVCEHACTLLCHPGPCPPCQASVQRRCGCGRLEKTVQCCQKEELLCEAVCEKPLNCGLHRCDRQCHAGSCDTCTEQVQHSCHCGKGERSVVCSVENLAVQRYGCGKACERPLGCGNHRCARLCHEGECEACADAPDRVRSCPCGREPIVPGSRQSCLDPVPTCSGPCGRKLACGPPGANHCCEAACHRGACPPCKKSTTVKCRCGSMDQPMRCKELTTRADDARCKKRCVRRRSCAKHKCNQVCCIDFDHICPKTCSLPLSCGRHRCDKPCHKGNCRPCHRVSFDELACDCGANVIYPPVPCGTRKPACDRPCGRRHACDHPALHNCHAEAECPPCVVLTTKYCHGRHEQRKTIPCYQESFSCGMPCAKPLTCGRHKCIRACHEDECAPEGAAGVCKQSCTRTREACPHPCNAPCHEGECPDVACKIVVEVTCECGNRKQQRTCHDFSKEYRRIATAQLASSVQEMQRGGSVELSDILGPVRPKNNKTLECNEECRMLERNRRLAIALQIRNPDLPSKLQPNYSETLRAYAKKDPALVQMIHDKLTELVKLAKESKQKSRSYSFPVMNREKRAIVHEMCHMFGVESVAYDAEPNRNVVATADRFTSWLPSMSLMEVLQRENGQRRIVVPSLNAWGKTTLTGAAASSSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00095371;
- 90% Identity
- iTF_00102766; iTF_00101376; iTF_00104843; iTF_00107388;
- 80% Identity
- -