Amel011272.1
Basic Information
- Insect
- Anopheles melas
- Gene Symbol
- stc
- Assembly
- GCA_000473525.2
- Location
- AXCO02017941.1:1692-4893[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.9 1.5e+04 -4.0 1.6 15 19 328 332 327 332 0.81 2 16 0.071 5.5e+02 0.5 0.5 4 10 361 367 360 368 0.95 3 16 1.4e-06 0.011 15.6 15.8 3 19 374 390 367 390 0.84 4 16 1.9 1.5e+04 -4.0 1.2 6 10 416 420 416 420 0.96 5 16 1.5e-05 0.12 12.3 10.6 3 19 428 444 426 444 0.91 6 16 2 1.6e+04 -5.8 3.2 9 13 450 454 448 455 0.58 7 16 7.2e-10 5.6e-06 26.1 10.1 1 18 484 501 484 502 0.98 8 16 1.1 8.6e+03 -3.3 1.5 11 16 533 538 533 539 0.77 9 16 1.5e-05 0.11 12.3 17.3 1 19 543 565 543 565 0.89 10 16 0.0098 76 3.3 7.0 1 11 605 615 605 616 0.94 11 16 0.59 4.6e+03 -2.4 1.0 4 10 620 626 619 626 0.90 12 16 1.4e-08 0.00011 22.0 17.9 1 18 632 649 632 650 0.98 13 16 2 1.6e+04 -6.8 12.5 1 18 683 706 683 707 0.73 14 16 4e-06 0.031 14.1 6.3 1 15 743 757 743 759 0.93 15 16 0.00014 1.1 9.2 15.3 4 19 779 796 777 796 0.93 16 16 0.26 2e+03 -1.3 0.2 7 12 811 816 811 816 0.85
Sequence Information
- Coding Sequence
- ATGGCAACGAGCGATGGTAATGCGGCCAGCAGCGGAAGCAGCAACACCTTCGACGACTTCATTTCTCAGTTCAATGCACGGGTGCAGATACAGCAGCAATTGCAATACCTCCGGACGCATCATACCACCAACAACAACAACGACCACCACCAGCAGCAACCGGCAACGTTCCAGTATTATGGCTTTACCTCCAATCTGACCCCAACGGCGGCGGAGTTTGTCCCCCGTAAGTACCAGACCGAAGCGAACGATGGAAATAGCGGTGGTGGTGGTGGTGCACCTCCACAAACGATGGTTTCGATGGCAACCACGATGCCTGCTGGTTCCGTCAGACCGGCTGCTGTTGCTGACAATGAGGATGATTATGATGCAGACGATCGGGAAAATGTTCAACGCGCTGGATCGTCGAACCACTACGGCGGAGGTGGAGGAACTGGTGGAGGTGGTGCAGGAGGAAGCAGAACGTCCGGCGGTGGACGTCCGCGGCGCAACGAAAGCCTTAAGCCACGCAACGGGTGGCACACGCGGGACGATCGGCCCGTCGCACGGCAGGGAAAGTGGAAGGCCAACCAGCAGACGGCCGGCAGTGGTCGGTTCCGGCCGCACGATGACGATTATGCCGCGGGTGACGCTCCACCCAGAAATGGAGAGCCGAACTCCCGCCGCAATGGGCAGCGCCAGTGGGGCAACCGTACGATTCAGCCCGATCCGGACGAAAGGCGCACGAACGGCCAGTCGAAGGGTGCCGGCGCCGCTCCGCAACCGGAATCCCCGTCGGCAACACCGCTCTCCAAGTGCTCCCAGCGCGAGAAGCTGATGCGCGAAATCGAATGCTACCGGCTGGAGTGTCTGGTGTGCTGCGAAATAGTGAAGCCAATGCAGTCGACCTGGTCCTGCGGCAACTGTTACCACATCCTGCATCTCGGGTGCGTTACCAAGTGGGCGACCAGCTCCCAGTCGGAGGATGGTTCCGGGTGGCGCTGTCCCGCCTGCCAGCACGTATCGAAGAAGGTGCCGCGCGAATACTTTTGCTTCTGCGGCAAGCAGAAAAACCCGGCCTACAATCGGGAAGACTTGGCGCACTCGTGCGGCGAAGTGTGCGGCCGGCGGGACGTTTGCGAGCATGCCTGCACGCTGCTGTGCCATCCCGGCCCGTGCCCACCGTGCCAGGCGTCGGTGCAGCGCCGGTGTGGCTGTGGCCGGTTGGAAAAAACGGTCCAGTGCTGCCAGAAGGAGGAGCTGCTGTGTGAGGCGGTGTGCGAGAAGCCGCTAAACTGTGAGCTGCATCGGTGCGGCCGGCGGTGCCACGCAGGGAGCTGCGACACGTGCACGGAGCAGGTCCAGCACAGCTGCCACTGTGGCAAGGGTGAGCGGTCGGTGGTGTGCAGCGTGGAAAACCTGGCCGTCCAGCGGTACGGGTGCGGGAAGGCGTGCGAACGTCCGCTCGGCTGCGGCAATCATCGGTGCGCCCGGCTGTGCCACGAGGGCGAGTGTGAGGCGTGTGCGGACGCACCGGACCGGGTACGGAGCTGTCCGTGCGGGCGGGAGCCGATCGTGCCGGGCAGTCGCCAATCGTGCCTCGACCCCGTTCCGACCTGCAGTGGGCCGTGCGGGCGGAAGCTGGCGTGCGGTCCGCCGGGCGCTAACCACTGCTGCGAGGCGGCGTGCCACCGGGGCGCCTGCCCGCCGTGCAAAAAGTCTACCACGGTCAAGTGCCGGTGCGGCAGCATGGATCAGCCGATGCGGTGCAAAGAGCTGACGACGCGCGCCGACGATGCGCGGTGCAAGAAGCGGTGCGTGCGGCGGCGCAGCTGCGCCAAGCACAAGTGCAACCAGGTGTGCTGCATCGACCTCGATCACATCTGTCCGAAGACGTGCTCGCTGCCGCTGTCCTGCGGCCGGCACCGGTGCGATAAGCCCTGCCACAAGGGCAACTGCCGGCCGTGCCATCGCGTGTCGTTCGACGAGCTGGCGTGCGACTGTGGCGCGAACGTGATCTATCCGCCGGTACCGTGCGGGACGCGCAAGCCGGCCTGCGATCGGCCGTGCGGCCGGAGGCACGCGTGCGACCATCCGGCCCTGCACAGCTGTCACGCGGAGGCGGAGTGTCCGCCGTGCGTGGTGCTGACGACGAAGCACTGCCATGGTAGGCACGAGCAGCGCAAAACGATCCCGTGCTACCAGGAATCGTTCAGCTGCGGCATGCCGTGCGCAAAGCCGCTCGCCTGCGGCCGGCACAAGTGTATCCGGGCGTGCCACGCGGATGAGTGTGCGCAGGAAGGGGCGGCCGGTTTGTGCAAGCAGAGCTGTACGCGGACGCGCGAAGCCTGTCCGCATCCGTGCAATGCGCCGTGCCACGAGGGCGAGTGTCCGGACGTGCCGTGCAAGATCGTGGTGGAGGTCACGTGCGAGTGTAGCAATCGCAAGCAGCAGCGCACGTGTCACGATTTCTCCAAAGAGTACCGGCGCATAGCAACCGCCCAGCTTGCCTCGTCCGTGCAGGAGATGCAGCGCGGCGGCTCGGTGGAGCTGAGCGACATTCTGGGTCCGTTGCGACCGAAGAACAACAAAACACTAGAATGCAACGAAGAGTGCCGAATGCTGGAGCGCAACCGCCGGCTGGCGATAGCGCTGCAGATACGCAATCCCGACCTGCCGTCCAAGCTGCAGCCGAACTACTCGGAAACGTTGCGCGCGTACGCGAAGAAGGACCCGGCCCTGGTGCAGATGATACACGACAAGCTGACCGAGCTGGTGAAGCTGGCGAAGGAAAGCAAGCAAAAGTCCCGCTCCTACTCGTTCCCGGTGATGAACCGCGAGAAGCGTGCGATCGTGCACGAAATGTGTCACATGTTCGGGGTGGAATCGGTCGCGTACGATGCGGAACCGAATCGGAACGTCGTCGCGACGGCGGATCGCTATACGTCCTGGCTGCCGAGCATGAGCCTGATGGAGGTACTGCAGCGTGAGAACGGGCAGCGACGGATCGTGGTGCCGAGCTTAAATGCATGGGGCAAAACGACCTTGACCGGTGCGGCCGCAAGCTCGAGCAGCAAATGA
- Protein Sequence
- MATSDGNAASSGSSNTFDDFISQFNARVQIQQQLQYLRTHHTTNNNNDHHQQQPATFQYYGFTSNLTPTAAEFVPRKYQTEANDGNSGGGGGAPPQTMVSMATTMPAGSVRPAAVADNEDDYDADDRENVQRAGSSNHYGGGGGTGGGGAGGSRTSGGGRPRRNESLKPRNGWHTRDDRPVARQGKWKANQQTAGSGRFRPHDDDYAAGDAPPRNGEPNSRRNGQRQWGNRTIQPDPDERRTNGQSKGAGAAPQPESPSATPLSKCSQREKLMREIECYRLECLVCCEIVKPMQSTWSCGNCYHILHLGCVTKWATSSQSEDGSGWRCPACQHVSKKVPREYFCFCGKQKNPAYNREDLAHSCGEVCGRRDVCEHACTLLCHPGPCPPCQASVQRRCGCGRLEKTVQCCQKEELLCEAVCEKPLNCELHRCGRRCHAGSCDTCTEQVQHSCHCGKGERSVVCSVENLAVQRYGCGKACERPLGCGNHRCARLCHEGECEACADAPDRVRSCPCGREPIVPGSRQSCLDPVPTCSGPCGRKLACGPPGANHCCEAACHRGACPPCKKSTTVKCRCGSMDQPMRCKELTTRADDARCKKRCVRRRSCAKHKCNQVCCIDLDHICPKTCSLPLSCGRHRCDKPCHKGNCRPCHRVSFDELACDCGANVIYPPVPCGTRKPACDRPCGRRHACDHPALHSCHAEAECPPCVVLTTKHCHGRHEQRKTIPCYQESFSCGMPCAKPLACGRHKCIRACHADECAQEGAAGLCKQSCTRTREACPHPCNAPCHEGECPDVPCKIVVEVTCECSNRKQQRTCHDFSKEYRRIATAQLASSVQEMQRGGSVELSDILGPLRPKNNKTLECNEECRMLERNRRLAIALQIRNPDLPSKLQPNYSETLRAYAKKDPALVQMIHDKLTELVKLAKESKQKSRSYSFPVMNREKRAIVHEMCHMFGVESVAYDAEPNRNVVATADRYTSWLPSMSLMEVLQRENGQRRIVVPSLNAWGKTTLTGAAASSSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00095371;
- 90% Identity
- iTF_00093875;
- 80% Identity
- -