Acul001548.1
Basic Information
- Insect
- Anopheles culicifacies
- Gene Symbol
- stc
- Assembly
- GCA_000473375.1
- Location
- KI422646:2473-5921[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.24 1.7e+03 -1.2 0.9 12 17 183 188 183 188 0.90 2 16 1.9 1.3e+04 -4.0 1.6 15 19 304 308 303 308 0.81 3 16 0.16 1.2e+03 -0.6 0.4 4 10 337 343 336 344 0.94 4 16 0.0023 17 5.3 19.4 3 19 350 366 339 366 0.84 5 16 5.9e-07 0.0042 16.7 6.8 1 19 402 420 402 420 0.94 6 16 2 1.4e+04 -6.9 3.8 4 11 425 428 424 430 0.54 7 16 1.9e-10 1.3e-06 27.9 13.3 1 18 460 477 460 478 0.98 8 16 3.3e-05 0.23 11.2 18.5 1 19 519 541 519 541 0.89 9 16 0.0095 68 3.3 7.0 1 11 581 591 581 592 0.94 10 16 0.57 4.1e+03 -2.4 1.0 4 10 596 602 595 602 0.90 11 16 1.3e-08 9.4e-05 22.0 17.9 1 18 608 625 608 626 0.98 12 16 0.56 4e+03 -2.3 0.8 6 10 655 659 654 659 0.89 13 16 2 1.4e+04 -6.0 9.5 10 18 673 682 662 683 0.78 14 16 3.7e-05 0.26 11.0 11.0 1 16 719 734 719 744 0.88 15 16 0.0053 38 4.1 12.8 4 19 753 770 751 770 0.92 16 16 0.19 1.4e+03 -0.9 0.8 7 12 785 790 779 790 0.70
Sequence Information
- Coding Sequence
- ATGGCAACGGGCGACGGGAGTGCAGCTGCTGGTAGCAGTGGCAGCAGCAGCTTCGACGATTTCATCTCCCAGTTCAATGCCCGTGTCCAAATACAGCAGCAACTGCAATACCTCCGATCGAATCCCACCACAAATAACGCCCAGCTGCAGCAACAGCAGCAACCGGCAACGTTCCAGTATTATGGATTTACCTCCAACCTAACTCCTACGGCAGCCGAATTTGTCCCACGCAAGTACCAAACGGAAACGAATGGTGGCGTTCCATTGGCGACATTGTCGATGGCAACCACCACACCCACGCTGATAACTGCCACTGAGATAAACGATGATGATGCCGTCGATGATAGAGAAAACATTCGTGCTGGGCCATCGAATTATTACGGTGCAGGGAGAGTTTCCACGAGCCGTCCGCGTAGAAACGAAAGCCTTAAGCCGCGTAACGGATGGCATACGCGAGACGACCGACCCGTGGGTCGGCAGGGCAAATGGAAATCAAACCAGGCTACTGCCGGAAGTGGCCGAATCCGAGCGCACGAGGATGATTTTTCGGGTGACTGTCCTCCACGGAATGGGGAAAGCTCTTCACGGCGTGCCGGAACAAGGCAGTGGGGAAATCGTACGATACAATCCGTACCCGACGAAAACCGTTCGAATGGTTCGTCAGCCAAAGCAGAAACGAAACCACCTCCACCAGAATCGCCAAAAATAATGCCACTGTCCAAGTGTTCCCAGCGCGAGAAACTTATGCGCGAGATCGAATGCTATCGGTTGGAGTGCGTGGTGTGCTGTGAAATCGTTAAACCGATGCAATCGGTTTGGTCCTGTCGAAACTGCTACCTCATACTACATCTTGCGTGCGTTACCAAGTGGGCTACCAGCTCACAGTCGGAGGATGGATCGGGCTGGCGCTGTCCGGCGTGTCAGCATGTAACGAAGAAGGTCCCACGAGAGTACTTTTGTTTCTGCGGCAAGCaaaaaaaCCCCACGTACAATAGGGAAGATTTGGCACACTCCTGTGGGGACGTATGTGGACGTCGTGAGCTTTGCGAGCATGCGTGCACACATCTCTGCCATCCTGGTCCGTGTGGATTATGTCAGGCTTCGGTACAGCGTATGTGTGGCTGCGGTCGGTTGACCAAACCGGTCCAGTGTTCTCAGAAAGAAGAGCTGCTGTGTGATGCCGTGTGTGATAAACCATTGAACTGTGCGCTTCATCGTTGCATGCAACGTTGTCACGCTGGGGCGTGCGAAATGTGTTCGGAACAGGTGCAGCATAACTGTCACTGTGGCAAGGCTGAACGCTTGGTCGCTTGTAGTGTGGAAAATCTTAAACAACTTCGCTATGGATGTGGGAAAACGTGTGGCCGGCCGTTGGGCTGTGGAAATCATCAGTGTCAGCGATTGTGTCACGAGGGAGAATGTGATCCATGTGCCGATGCGCCCGAGCGCGTCCTCAGCTGTCCGTGCGGACGGGAAGCGATTGAACCGGGCAGCCGGAAATCGTGCCTCGATCCGATACCAACCTGTACCGGAATCTGTGGCCAAAAGTTAGCTTGCGGTCCGCCTGGTGCGAACCATTGCTGCGAGGCGCAGTGTCATCGTGGTGATTGTCCACCGTGCAAAAAGTCGACCACCGTGAAGTGTCGTTGCGGAAGCATGGATCAACCCATGAAGTGCAAAGACCTGACGACTCGTGCCGATGATGCACGTTGCAAAAAACGGTGCGTTCGAAGGCGCAGCTGCGCGAAACACAAGTGTAATCAAGTGTGCTGTATCGATTTTGATCACATATGTCCGAAAACTTGTTCGCTGCCACTTTCTTGTGGACGACATCGCTGTGATAAACCATGCCACAAAGGTAACTGTCGGCCCTGTCATCGCGTTTCGTTCGACGAGCTGACTTGTGACTGTGGCGCCAATGTGATCTATCCGCCCGTGCCCTGCGGTACGAAGAAACCGGCCTGTGAACGACCGTGCAACCGTCGACATGCGTGCGATCATCCAGCCCTGCACAATTGTCACGCGGAGCCGGAATGTCCACCGTGCGTTGTGCTAACGACAAAATCTTGCTTTGGAAAGCACGAACAACGCAAAACCATCCCGTGCTATCAGGCATCGTTTAGTTGCGGTATGCCATGTGGGAAACCACTCGCATGTGGTCGACACAAATGCATCAGAGCATGCCACGAAGATGAATGCATGCTAGAAGGAACGGTTTGCAAACAGAGCTGCACCAAAGCACGGGAAGCGTGTGTGCATCCGTGCAATGCGCCCTGTCACGAGGACGAATGTCCCGAAATTCCGTGCAAGATTATGGTGGACGTAACGTGCGAATGTGGAAACCGTAAGCAGCAGCGCACGTGTCATGATTTCTCCCAAGAATACCGTCGGATAGCAACGACCCAGCTTGCCTCGTCCGTCCAAGAAATGCAACGTGGAGGATCGATCGAACTGAGCGACATTCTGGTACCGATTCGACCGAAAAACAATAAAACGTTGGAGTGTAATGAAGAATGCCGACTGCTTGAACGTAATCGGCGTATTGCGATAGCGCTGCAGATTCGCAACCCCGATCTACCGTCGAAGCTGCAACCGAATTACTCCGAAACGTTGCGTGCGTATGCAAAGAAAGATCCGGCTTTAGTGCAGATGATACACGAAAAATTAACCGAACTGGTCAAGCTGGCCAAAGAAAGCAAACAAAAGTCACGCTCCTATTCCTTTCCGGTTATGAATCGTGAAAAGCGTGCCGTGGTGTACGAGATGTGCCACATGTTTGGTGTCGAAGCGGTTGCATACGATGCAGAACCGAATCGGAACGTTGTCGCAACAGCAGATCGTCTTACGTCGTGGTTACCGAGCATGAGCCTAATGGAGGTACTGCAGCGTGAAAATGGTCAGCGCCGTATTGTCGTACCGAGTCTGAATGCCTGGGGTAGAACGAACTATGCTGGTGCGGCAAGTTCGAGCAGTAAATGA
- Protein Sequence
- MATGDGSAAAGSSGSSSFDDFISQFNARVQIQQQLQYLRSNPTTNNAQLQQQQQPATFQYYGFTSNLTPTAAEFVPRKYQTETNGGVPLATLSMATTTPTLITATEINDDDAVDDRENIRAGPSNYYGAGRVSTSRPRRNESLKPRNGWHTRDDRPVGRQGKWKSNQATAGSGRIRAHEDDFSGDCPPRNGESSSRRAGTRQWGNRTIQSVPDENRSNGSSAKAETKPPPPESPKIMPLSKCSQREKLMREIECYRLECVVCCEIVKPMQSVWSCRNCYLILHLACVTKWATSSQSEDGSGWRCPACQHVTKKVPREYFCFCGKQKNPTYNREDLAHSCGDVCGRRELCEHACTHLCHPGPCGLCQASVQRMCGCGRLTKPVQCSQKEELLCDAVCDKPLNCALHRCMQRCHAGACEMCSEQVQHNCHCGKAERLVACSVENLKQLRYGCGKTCGRPLGCGNHQCQRLCHEGECDPCADAPERVLSCPCGREAIEPGSRKSCLDPIPTCTGICGQKLACGPPGANHCCEAQCHRGDCPPCKKSTTVKCRCGSMDQPMKCKDLTTRADDARCKKRCVRRRSCAKHKCNQVCCIDFDHICPKTCSLPLSCGRHRCDKPCHKGNCRPCHRVSFDELTCDCGANVIYPPVPCGTKKPACERPCNRRHACDHPALHNCHAEPECPPCVVLTTKSCFGKHEQRKTIPCYQASFSCGMPCGKPLACGRHKCIRACHEDECMLEGTVCKQSCTKAREACVHPCNAPCHEDECPEIPCKIMVDVTCECGNRKQQRTCHDFSQEYRRIATTQLASSVQEMQRGGSIELSDILVPIRPKNNKTLECNEECRLLERNRRIAIALQIRNPDLPSKLQPNYSETLRAYAKKDPALVQMIHEKLTELVKLAKESKQKSRSYSFPVMNREKRAVVYEMCHMFGVEAVAYDAEPNRNVVATADRLTSWLPSMSLMEVLQRENGQRRIVVPSLNAWGRTNYAGAASSSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00095371;
- 90% Identity
- iTF_00105531;
- 80% Identity
- -