Tsal004457.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tuberolachnus salignus
Gene Symbol
Paxbp1
Assembly
GCA_956483605.1
Location
OY101430.1:31782586-31787318[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.07 8.2e+02 -0.3 0.1 58 170 276 384 259 401 0.67
2 2 6.6e-26 7.7e-22 78.5 8.8 4 272 541 750 538 752 0.94

Sequence Information

Coding Sequence
ATGGCGATGCAATTTAAGAAGCCCAAACGGAATTTGAGAGTTAGAGATTCTGATGGCATTTATGACAatgaaaacgaagaaaaaattaatgtagATACAGTACTTAAGCTGCCGAAATCACAGAAAGATAAGGGTTTGAAGAAAATCAACACTTTGAGTTTTGGCGATGAGTTGAATGAGTGTGATGATGGTGAAGAGTTCAAAGTCAAAAAATcatcatatagtaaaaaaattaaaaagcaaaTGAGTAAAGAAAAAATGGGTCgagataaaatagaaaatggCAAGAAATCTAAAGTTATAATATGTGATACCATACGACCAATTGTTAGAgaaacacaaacaaattttaacTCTGTACCTGTGGAAAAAGAAATAATGCTTACAGGCCGTGCTGCTGAAATGGCTGGTTATGAATCATCCGATGACGATGATTCATATAGTTCATCTACACATAAATTTTCAAATCCCGaccaagttaaaatattattaaaaaaaggtCAAATTCCTGATGCAGCATTAATTCATGCTGCCAGAAAACGTAGGCAACAGGCACGTGATTTAGGAGAAGATTTTATACCAATATCATCACAGTCtcacggtgAATCGAATATTGAAAATGGACAAATTACCGGTAGGCGTTTAACACGAGAAGAAGATGAATTAGAAGATAGTGAtgatgatggtagaattatcaTGTCTGGAATTGTTAGTCAAGCTGAGGATCGGAAAAAGAATATACATATTACTATGGCTGatCACACAAACAATAGTGATTACCAAGACCTTGATGAACTTGATGAAGATAATGATTGGGAAACTCAACAGATAAGAAAAGCAGTTACAGGATCACAGTTAGCTGCAGCCCAACAGGAATCTGCTGGTATGGCCgccatatacaataatattgtttctcaGTCAATTGTTACCCAAGAAGGAACAACTATACCAACATTAGTCAATCAAAAACCTCAATTTCCTGATTCCTATGTTCCACAAGGGTTGATGTCTACAATGAGCCCAGATGATGTCATAGATAAAATTGTAGAAATattgagtgaaatgaaagaaaaacgaaatccagaacaaaaatattttgaaaatatgattaatgaATTACCAGAAATCAAGAATAGAATTGAAATGCTTAAAAAAAGAGTTCCTGAGTTAGCTGAATGTTTTCAGTTTTATCAAGATTTGCGTGGGTACGTCACTGATCTGGTAGAATGTCTTGATGAAAAGaTTCCTATTCTTGTGGGACTGGAACAACGTGTATGTAAGTTGTATGATAAAAGACGTACAGATCTATTAGCAAGGCGTAGACAAGATGTTCGAGATCAAGCAGACGAAGCTTCAtctaataAATCGGGGAATTTATCAACTTTGCATACAAGATCTGAAGAACAACAAAGAAGAGCTGCAGAGCGTGAAGGCCGCCGTATTAGACGTATGAGGATGAGAGAATTAAAAGCGATAAGTAAACACGCAGATGGTATGTCTAGCGATGAAGAAGTTCCTGAAACTGATGCATCTGCGTTTAGAACTCAgttagaGGTTATAAAAAGTGATTCACATCTATTAATGGATGATGTTCTTGAACAATTTGCATCAGTTGATTTAGTTTTAAAGCAAATGTTAGAATGGAAAAATAAACAACTGAACAGTTATGTTGAAGCATATGTTAATGTGTGTTTACCAAATATGGTAGGACCTTTTGTTCGAATTGAAATGTTAACCTGGAATCCATTGGAGGACAATTTGATGTTTGAAGATATGTTGTGGTATAAAAGTATGAAACAGTATACAATGAAGAGTGTAAATAATGTAGaacaattatcaaaaaatgttgatttagaattaattcctaaaataatagaaaaagttgtgcttaataaaattgagcAAATGATTACAAGTCAATGGGATCCATTGTCATCAAAACAGACTAAACATATTTCTTGTATTATTAAGCACATACTCGACAAATACCCTACCATAGATCCAGATAGTAAATTTGTAATGTTATTGTTCACCAATTTAGTAAATAGGATTCGAGATGCTGTTGATTATGATGTATTTATTCCTATTTCATGTAGACAAATTATGAATACTGGTCGTATGAATATGTTTTTTCAACGACAATTTAACATAGCTGTAAAACTTTTGAGCAATATACTTTGTTGGCATCAAATAATCGAAGACACAGTGTTGATTGATTTAGCTATAAATCAAATACTTAATAGATACTTATTAACATCTATTAGAACTCTTCAGCCATTAGAagcagttttaaaaattacaatgattgcTCGTGCACTACCTAGTTCATGGTTATCTTATGGAAGTAATACACCTAAAGAATTAACCTCATTTTTAAATCAGTCAAAATTAATTGCAATGAATATAGACAAATCACAACCTCAGGCAAAgCATGCTTTGGATAAACTAAATGAAGTGCTCAAACTGTGA
Protein Sequence
MAMQFKKPKRNLRVRDSDGIYDNENEEKINVDTVLKLPKSQKDKGLKKINTLSFGDELNECDDGEEFKVKKSSYSKKIKKQMSKEKMGRDKIENGKKSKVIICDTIRPIVRETQTNFNSVPVEKEIMLTGRAAEMAGYESSDDDDSYSSSTHKFSNPDQVKILLKKGQIPDAALIHAARKRRQQARDLGEDFIPISSQSHGESNIENGQITGRRLTREEDELEDSDDDGRIIMSGIVSQAEDRKKNIHITMADHTNNSDYQDLDELDEDNDWETQQIRKAVTGSQLAAAQQESAGMAAIYNNIVSQSIVTQEGTTIPTLVNQKPQFPDSYVPQGLMSTMSPDDVIDKIVEILSEMKEKRNPEQKYFENMINELPEIKNRIEMLKKRVPELAECFQFYQDLRGYVTDLVECLDEKIPILVGLEQRVCKLYDKRRTDLLARRRQDVRDQADEASSNKSGNLSTLHTRSEEQQRRAAEREGRRIRRMRMRELKAISKHADGMSSDEEVPETDASAFRTQLEVIKSDSHLLMDDVLEQFASVDLVLKQMLEWKNKQLNSYVEAYVNVCLPNMVGPFVRIEMLTWNPLEDNLMFEDMLWYKSMKQYTMKSVNNVEQLSKNVDLELIPKIIEKVVLNKIEQMITSQWDPLSSKQTKHISCIIKHILDKYPTIDPDSKFVMLLFTNLVNRIRDAVDYDVFIPISCRQIMNTGRMNMFFQRQFNIAVKLLSNILCWHQIIEDTVLIDLAINQILNRYLLTSIRTLQPLEAVLKITMIARALPSSWLSYGSNTPKELTSFLNQSKLIAMNIDKSQPQAKHALDKLNEVLKL