Elan021248.1
Basic Information
- Insect
- Eriosoma lanigerum
- Gene Symbol
- Paxbp1_1
- Assembly
- GCA_013282895.1
- Location
- scaffold:18726193-18732822[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.32 4.5e+03 -2.4 0.0 54 87 342 371 337 394 0.66 2 2 3.2e-26 4.5e-22 79.6 7.6 4 272 540 749 537 751 0.92
Sequence Information
- Coding Sequence
- ATGGCGATGCAATTTAAGAAACCCAAACGAAATTTGCGAGTCAGAGATGCAGACGGTTTGTACGAAAATGAAAATGAAGAAAAAATAGATGTGGATACTTGTAAATTGCCAAAAGCTCTTAAAGAAAAAGTGTCAAAGAAAGTTAACACTTTAAGTTTTGGCGACGAGATGAATGAATGTGATGATGGTGAGGAGTTCAAAGTTAAAAAGTCTTCATATAGTAAAAAAATTAAAAAGCAAATGACTAAAGAAAAAATGGGCAGAGATAAAATAGAAAATGGCAAAAAGTCTAAACATATAAATGATACAATAAACCCGATTATTAAAGAAAAACAAACAAATTTTAATTCTGAACCCATAGAAAAAGAAATAATGCTTACAGGCCGTGCTGCTGAAATGGCTGGCTATGAATCGTCTGACGAAGAACCGGATTCATATAATTCATCGGTTCATCGGTTTTCAAATCCTGATCAAGTTAAAATATTATTAAAAAAGGGTCAAATACCTGATGCAGCATTAATTCATGCCGCTAGAAAACGAAGGCAACAAGCTCGAGATTTAGGAGATGATTTTATACCAATATCGTCATCACAATCTCATGGCGAAACTAATGTCGAGAATGAACAAGTTACTGGTCGACGTTTAACAAGAGAAGAAGATGAATTGGAAGATAGTGATGATGATGGTATAATTGTAATGTCTGGAATTGTAAGTCAAGCTGAGGATCGAAAAAAAAATTTACATATTACAATGACTGATCACACTAACAACACTGTACTTGAAGATCCTGATGAACTTGATGAAGATAATGATTGGGAAACTCAACAAATAAGAAAAGCAGTTACAGGATCGCAGTTAGCTGCGGCACAACAGGAATCTGTTGGAATGGGTGCTATGTATAATAATATTATTTCTCATTCTATTATACAAGAACCAACTATGATGCCAACATTAATGAATCCAAAAATTTGTTTTCCTGATTCTTATATTCCACAAGGGGTGATATCTACAATGAGCGTGGATGATATCATAAATAAAACTAGGGAAATATTAAGCGAACTAAAAGAAAATCGAAATCCGGATCAGAAATATTTTGAAGATATGTATAATGAAATACCAGAGATAAAGAATAGAATTGAAAAATTAAAAAAGAATGTTCCTGAGTTAGCTGAATGTTTTCAGTTTTATCAAGATTTGCGTGGGTACGTCACTGATCTGGTAGAATGTCTTGATGAAAAGATTCCTGTGCTTGTGGAATTAGAACAACGTATATGTAAGTTATATGATAAAAGACGTACAGATTTAATAGCAAGGCGTAGACAAGATGTCCGAGATCAAGCTGATGAAGTTACATCAAATAAATCAGGAACATCTTTAACTACTCATACAAGATCTGAAGAACAACAAAGAAGAGCTGCAGAACGTGAAGGTCGTCGTATACGACGTATGAGAATGAGAGAATTAAAAACTATAAGTAAACATGTAGATGGCATGTCTAGTGATGAAGAAGTTCCTGAAACAGATGCATCTGCATTTAGATCTCAAATAGAGGTTATAAAAAGTGATTCGGAGTTGTTAATGGATGATGTTCTTGAAGAATTTTCATCGATTGATATAGTATTAAAACATATGTTTGAATGGAAAAACAAATATCTTGAAAGTTATGTAGAAGCATATGTTAATGTGTGTTTACCAAAATTACTAGGGCCTTTTGTTCGTCTAGAAATGCTGACATGGAATCCATTGGAGAGTAATTTGAAGTTTGAAGATATGTTATGGTATAAAAGTATGCAAAAGTATACAATGAAGAAAGTAAATAATGTAGAACAATTATCAAAAGACGTTGATTTAGAATTAATACCTAAAATAATAGAAAAAGTTGTGCTATATAAAATTGATCAAATGGTTATGTGTCAATGGGATCCATTGTCATCAAAACAGACAAAACATATTTCAGGGCTTATTAGGCACATATTGGATAACTATCCTACTATTGATCCTGACAGTAAACTATTAATAATATTATTAACAAATGTCATAGATAGGATTCGAGATGCAGTTGATTATGATGTATTCATTCCCATATCTTCTAGACAAGTAATGAATACTGGTCGAATGAATGTGTTTTTCCAAAGACAATTTAATATTACTGTAAAATTATTGAGTAACATAATTTGTTGGCATCAAATTATTGATGACTCAGTAATAATAGATTTAGCTGTGAATCAAATACTTAATAGATATTTATTAACATCTGTACGAACACTACAACCCCTAGATGCTGTATTAAAAATCACAATGATTGCCCGTGTGTTACCAAATTCTTGGTTATCTTATGGGACTACTACACCTAAAGAATTGACATCATTTTTAAATCAGTCAAAATTAGTTGCAATGGAAATAGATAAATCACAACCACAAGCAAAATTTGCTTTGGATAAACTTAACGAAGTGTTAAAACTGTGA
- Protein Sequence
- MAMQFKKPKRNLRVRDADGLYENENEEKIDVDTCKLPKALKEKVSKKVNTLSFGDEMNECDDGEEFKVKKSSYSKKIKKQMTKEKMGRDKIENGKKSKHINDTINPIIKEKQTNFNSEPIEKEIMLTGRAAEMAGYESSDEEPDSYNSSVHRFSNPDQVKILLKKGQIPDAALIHAARKRRQQARDLGDDFIPISSSQSHGETNVENEQVTGRRLTREEDELEDSDDDGIIVMSGIVSQAEDRKKNLHITMTDHTNNTVLEDPDELDEDNDWETQQIRKAVTGSQLAAAQQESVGMGAMYNNIISHSIIQEPTMMPTLMNPKICFPDSYIPQGVISTMSVDDIINKTREILSELKENRNPDQKYFEDMYNEIPEIKNRIEKLKKNVPELAECFQFYQDLRGYVTDLVECLDEKIPVLVELEQRICKLYDKRRTDLIARRRQDVRDQADEVTSNKSGTSLTTHTRSEEQQRRAAEREGRRIRRMRMRELKTISKHVDGMSSDEEVPETDASAFRSQIEVIKSDSELLMDDVLEEFSSIDIVLKHMFEWKNKYLESYVEAYVNVCLPKLLGPFVRLEMLTWNPLESNLKFEDMLWYKSMQKYTMKKVNNVEQLSKDVDLELIPKIIEKVVLYKIDQMVMCQWDPLSSKQTKHISGLIRHILDNYPTIDPDSKLLIILLTNVIDRIRDAVDYDVFIPISSRQVMNTGRMNVFFQRQFNITVKLLSNIICWHQIIDDSVIIDLAVNQILNRYLLTSVRTLQPLDAVLKITMIARVLPNSWLSYGTTTPKELTSFLNQSKLVAMEIDKSQPQAKFALDKLNEVLKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01499641;
- 90% Identity
- -
- 80% Identity
- -