Meup035873.1
Basic Information
- Insect
- Macrosiphum euphorbiae
- Gene Symbol
- PAXBP1
- Assembly
- GCA_949089665.1
- Location
- CARXXK010000004.1:4599660-4604528[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.45 1.6e+04 -2.9 0.1 55 94 340 373 330 395 0.66 2 2 3.3e-27 1.2e-22 82.8 7.3 4 272 536 745 533 747 0.92
Sequence Information
- Coding Sequence
- ATGGCAATGCAATTTAGGAAGCCTAAACGAAACCTACGTGTGAGAGACTCAGACAATGTTCTTCAGGACaatgaaaatgaagaaaaaatggATGTGGATACAGTACTGAAAATGCCAAAACCACTAAAAGAAAAGACAATAAAGAAAGTTAACACTTTGAGTTTTGGTGATGAGTTAAATGAATGTGATGATGGCGAAGAATTCAAAGTTAAAAAATCAtcatatagtaaaaaaataaaaaagcaaatgaataaagaaaaaatggGAAGAGATAAAGTAGAAAATGGCAAAAAATCAAAAGCTATTGCTGATACAATGAAACCTATTGTCgatgaaaaaccaaaaaattttaacTCTGAACCTGTTGAAAAGGAAATAATGCTTACAGGCCGAGCTGCTGAAATGGCTGGCTATGTATCATCGGATGAAGAACCTGATTCATACAGTTCTTCATCTCATCGATTTTCTAATCCTGAccaagttaaaataatattaaaaaAAGGACAAATTCCCGACGCAGCATTAATTCATGCTGCTCGAAAACGAAGACAACAAGCACGTGATTTGGGAGAAGATTTCATACCAATATCATCACAATCTCATaaTGAGTCAAAAGTTGACAATGAACAAATTACTGGTCGACGTTTAACACGAGAAGAAGATGAATTAGAAGATAGTGATGATGATGGTATTATTGTTATGTCAGGAATTGTTAGTCAAGCTGAGGATCGGAAAAAAAGCTTACATACTACGATGGctgATCACACTAACAACACTGAGTTTGAAGACCCTGATGAACTTGATGAAGACAATGATTGGGAAACTCAACAAATAAGGAAAGGAGTAACAGTATCACAGTTAGCTGCTGCTCAACAGGAATCTTCCGGCATGAGTGCCCTGTACAACAATATGGTTATACAAGAGCAATCTATGATTCCAATAGTAATGAGTCAAAAACCTCGATTTTCTGACTCGTACGCTCCACAAGCACCGATGACTACAATGAACTTAGatgatatcataaataaatctaaagaaatagttagtgagatgaaaaaaaatcagaatccagatcagaaatattttgaagataTGATAAATGAAATACCAGAGATTAAGAGTAGAAACGAAAAGCTAAAAATGAATGTTCCAGAGTTGGCTGATTGTTTTCAGTTTTATCAAGATTTGCGTGGGTACGTCACTGATCTGGTAGAATGTCTTGATGAAAAGattCCTTCACTTGTGGGATTGGAACAACGTATATCAAAGATGTATGACAAAAGACGTACAGATTTGTTAGCCAGACGTAGACAAGATGTTCGAGATCAAGCAGAAGAATCTTCAacaaataAATTAGGAACTCCAACAACACATACAAGATCTGAAGAACAGCAAAGAAGAGCGGCAGAGCGCGAAGGTCGTCGTATCAGACGTATGAGAATGAGAGAAATAAAAGCAATTAGTAAACATGCAGATGGAATGTCTAGCGATGAAGAAGTTCCTGAAACAGATGCATCAGCATTTAGAAATCAATTAGagaTTATTAAAAGTGACTCAAACCTGTTATTGGACGATGTTCTTGAGGAATTTGCATCAGTTGATTTAGTGTTAAAACATATGCTAGAATGGAAAAACAAGTACTTGGAAAGCTATATTGAAGCTTATGTAAATGTGTGTTTACCCAAGTTAGTGGGACCTTTTGTTCGTATAGAAATGCTTACATGGAATCCGTTGGAGGATGATCTGAAGTTGGAAGATATGTTTTGGTATAAAAGTATGCAAAAGTATACGATGAAAggaaataataatgttgatCAGTTGATAAAAGATGTTGATTTAGAATTAATCCCCAAGATAATAGAAAAAGTTGTGCTCATTAAAATTGACCaaatggTTACTAGTCAGTGGGATCCATTGTCATCAAAACAGACCAAACATATCTGTAGTATTGTGAAGCATATATTGGACATGTACCCAACTATTGATCCagatagtaaattattaatgatgttGATGACCAATATAGTGGATAGAATACGAGATGCGGTTGATTATGACGTGTTTATTCCAATATCCTCTAGACAAGTAATGAATACTGGCCGtatgaatgtattttttcaaAGACAGTTTAACATGGCTGTAAAATTACTGGGCAATATACTGACTTGGCATCGAATTATTGAAGACGTTGTGTTAATAGATTTAGCCATAAATCAAATACTCAACAGATATTTGTTAACATCTGTCCGAACGTTACAGCCACTAGAAgctattttgaaaattacattgATTGCTCGTATGATACCTAGTTCATGGTTGTCGTATGGAAACACTACCCCTAAAGAATTAACACCATTTTTAAACCAGTCGAAATTAGTTTCAATGGAAATAGATAAGTCTCATCCACAGGCAAAgctggCCCTGGATAAACTCAATGAAGTTCTCAGACTATGA
- Protein Sequence
- MAMQFRKPKRNLRVRDSDNVLQDNENEEKMDVDTVLKMPKPLKEKTIKKVNTLSFGDELNECDDGEEFKVKKSSYSKKIKKQMNKEKMGRDKVENGKKSKAIADTMKPIVDEKPKNFNSEPVEKEIMLTGRAAEMAGYVSSDEEPDSYSSSSHRFSNPDQVKIILKKGQIPDAALIHAARKRRQQARDLGEDFIPISSQSHNESKVDNEQITGRRLTREEDELEDSDDDGIIVMSGIVSQAEDRKKSLHTTMADHTNNTEFEDPDELDEDNDWETQQIRKGVTVSQLAAAQQESSGMSALYNNMVIQEQSMIPIVMSQKPRFSDSYAPQAPMTTMNLDDIINKSKEIVSEMKKNQNPDQKYFEDMINEIPEIKSRNEKLKMNVPELADCFQFYQDLRGYVTDLVECLDEKIPSLVGLEQRISKMYDKRRTDLLARRRQDVRDQAEESSTNKLGTPTTHTRSEEQQRRAAEREGRRIRRMRMREIKAISKHADGMSSDEEVPETDASAFRNQLEIIKSDSNLLLDDVLEEFASVDLVLKHMLEWKNKYLESYIEAYVNVCLPKLVGPFVRIEMLTWNPLEDDLKLEDMFWYKSMQKYTMKGNNNVDQLIKDVDLELIPKIIEKVVLIKIDQMVTSQWDPLSSKQTKHICSIVKHILDMYPTIDPDSKLLMMLMTNIVDRIRDAVDYDVFIPISSRQVMNTGRMNVFFQRQFNMAVKLLGNILTWHRIIEDVVLIDLAINQILNRYLLTSVRTLQPLEAILKITLIARMIPSSWLSYGNTTPKELTPFLNQSKLVSMEIDKSHPQAKLALDKLNEVLRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01499641;
- 90% Identity
- iTF_00463343; iTF_00019026; iTF_01032889; iTF_00184575; iTF_01304180; iTF_00973043; iTF_01167607; iTF_01328631; iTF_01031969; iTF_01305549; iTF_01304855; iTF_00135320; iTF_00134268; iTF_00136127;
- 80% Identity
- -