Asol019457.1
Basic Information
- Insect
- Aulacorthum solani
- Gene Symbol
- PAXBP1
- Assembly
- GCA_008528875.1
- Location
- PVMI01079635.1:10496-15222[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.31 5.6e+03 -2.4 0.1 58 94 276 315 245 411 0.56 2 2 1.4e-27 2.6e-23 84.0 6.6 4 272 535 744 532 746 0.92
Sequence Information
- Coding Sequence
- ATGGCTATGCAGTTTAAGAAGCCTAAACGAAACCTACGTGTCAGAGACTCAGACGGTTTCCAAGACAATGAAAATGAAGACAAAATGGATGTGGATACAGTACTTAAAATGCCAAAACCACAAAAAGAAAAGACAATAAAGAAAGTTAACACTTTGAGTTTTGGTGATGAGTTAAATGAATGTGATGATGGCGAAgaattcaaagttaaaaaatcatcatatagtaaaaaaataaaaaaacaaatgaataaagaaaaaatgggtCGAGATAAAGTAGAAAATGGCAAAAAATCAAAAGCTAATCCTGATGCAACAAAACCTATTGTCAATGAAagacaaacaaattttaattCTAAACCTGTTGAAAAGGAAATAATGCTTACGGGCCGAGCTGCTGAAATGGCCGGCTATGTATCATCAGACGAAGAACCTGATTCATACAGTTCTTCATCTCATCGATTTTCTAATCCTGaccaagttaaaataatattaaaaaAGGGACAAATTCCTGACGCAGCATTAATTCATGCTGCTCGAAAACGGAGGCAACAAGCACGAGATTTGGGAGAAGATTTTATACCAATATCATCACAATCTCAtaatgAATCGAAAGTTGACAATGAGCAAATTACCGGTCGACGTTTAACACGCGAAGAAGATGAATTAGAAGATAGTGATGATGatggtattattgttatgtcaGGAATTGTTAGTCAAGCTGAGGatcgaaaaaaaagtttacataCTACAATAGCtgATCCCACTAACAACACTGAGTTTGATGACCCTGATGAACTTGATGAAGATAATGATTGGGAAACTCAACAAATAAGGAAAGCAGTGACAGGATCACAATTAGCTGCTGCTCAACAGGAATCTGCAGGAATGGCTGCCATGTACAACAATATGGTTATTCAAGAGCAAGCTATGATGCcaacattaataaatcaaaaacctCGATTCTCTGACTCGTACTCTCCACAAGCACCAATGACTATAATGAACCTAGatgatatcataaataaatctaaagaAATagtaagtgagataaaaaaaagtcagaTACCAGATCAGAAATATCATGAAGCTTTGATAAACGAAATACCAGAGAATAAGATTAGAAATGAAAAGCTAAGAAATAATGTTCCCGAGTTGGATGattgttttcagttttatCAAGATTTGCGTGGGTACGTCACTGATCTGGTAGAATGTCTTGATGAAAAGattcCTTCACTTGTGGGATTAGAACAACGTATAGCTAAGATGTATGAAAAAAGACGTACTGATTTGGTAGCCAGGCGTAGACAAGATGTTCGAGATCAAGCAGAAGAATCTTCAACTAATAAATTAGGAGCTTCATCAACACACTCAAGATCTGAAGAACAACAAAGAAGAGCTGCAGAGCGTGAAGGTCGTCGTATCAGACGAATGAGAATGAGAGAAATTAAAGCAATAAGTAAACATGCAGATGGAATGTCTAGCGATGAAGAAGTTCCTGAAACAGATGCGTCAGCATTTAGAAatcaattagagGTTATTAAAAGTGACTCAAACTTGTTATTGGACGATGTTCTTGAGGAATTCGCATCAGTTGATTTAGTGTTAAAACATATGCTAGAATGGAAAAACAAGTACTTGGAAAGCTATATTGAAGCTTATGTAAATGTGTGTTTACCCAAGCTAGTGGGACCTTTTGTTCGTATAGAAATGCTTACATGGAATCCATTAgaggACAATTTGAAGTTAGAAGATATGTTTTGGTATAAAAGTATGCAAAAGTATACAATgaaaggaaataataatattgataagttGACAAAAGATGTTGATTTGGAATTAATCCCAAAAGTAATAGAAAAAGTTGTGCTCATTAAAATTGATCaaatggTTACGAGTCAGTGGGATCCATTGTCTTCAAAACAGACCAAACACATCTGTAGAATTGTTAAGCATATATTGGACGTGTACCCAACTATTGATCCAGACAGTAAATTGTTGATGATGTTGGTGACTAATATAGTAGACAGAATACGAGATGCTGTTGATTATGATGTGTTTATTCCAATATCCTCTAGACAAGTAATGAACACTGGTcgtatgaatgtattttttcaaaggCAGTTTAACATGGCTGTAAAATTATTGGGCAATATCCTGAGTTGGCATCGAATCATTGAAGACGTTGTTTTAATAGATTTAGCCATAAATCAAATACTTAACAGATATTTGTTGACATCTGTTCGAACATTACAGCCACTAGaagctattttaaaaattacaatgATTGCTCGTATGTTACCTAGTTCATGGTTGTCGTATGGAAACACTACCCCAAAAGAACTAACACAGTTTTTAAACCAGTCAAAATTAGTTTCAATAGAGATAGATAAGTCACATCCACAGGCAAAGCTGGCCTTGGATAAACTCAACGAAGTTCTCAGACTATGA
- Protein Sequence
- MAMQFKKPKRNLRVRDSDGFQDNENEDKMDVDTVLKMPKPQKEKTIKKVNTLSFGDELNECDDGEEFKVKKSSYSKKIKKQMNKEKMGRDKVENGKKSKANPDATKPIVNERQTNFNSKPVEKEIMLTGRAAEMAGYVSSDEEPDSYSSSSHRFSNPDQVKIILKKGQIPDAALIHAARKRRQQARDLGEDFIPISSQSHNESKVDNEQITGRRLTREEDELEDSDDDGIIVMSGIVSQAEDRKKSLHTTIADPTNNTEFDDPDELDEDNDWETQQIRKAVTGSQLAAAQQESAGMAAMYNNMVIQEQAMMPTLINQKPRFSDSYSPQAPMTIMNLDDIINKSKEIVSEIKKSQIPDQKYHEALINEIPENKIRNEKLRNNVPELDDCFQFYQDLRGYVTDLVECLDEKIPSLVGLEQRIAKMYEKRRTDLVARRRQDVRDQAEESSTNKLGASSTHSRSEEQQRRAAEREGRRIRRMRMREIKAISKHADGMSSDEEVPETDASAFRNQLEVIKSDSNLLLDDVLEEFASVDLVLKHMLEWKNKYLESYIEAYVNVCLPKLVGPFVRIEMLTWNPLEDNLKLEDMFWYKSMQKYTMKGNNNIDKLTKDVDLELIPKVIEKVVLIKIDQMVTSQWDPLSSKQTKHICRIVKHILDVYPTIDPDSKLLMMLVTNIVDRIRDAVDYDVFIPISSRQVMNTGRMNVFFQRQFNMAVKLLGNILSWHRIIEDVVLIDLAINQILNRYLLTSVRTLQPLEAILKITMIARMLPSSWLSYGNTTPKELTQFLNQSKLVSIEIDKSHPQAKLALDKLNEVLRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01499641;
- 90% Identity
- iTF_00940493;
- 80% Identity
- -