Tdiv013385.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tetrapedia diversipes
Gene Symbol
lola
Assembly
GCA_033822845.1
Location
JAOPTO010001219.1:73700-76718[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.2e-16 8.6e-13 48.5 0.0 2 42 374 415 373 428 0.95

Sequence Information

Coding Sequence
ATGTCGATGCAACAGTTCTGTTTACGGTGGAATAATCATCAACCAAACTTTATTTCTGTGTTTTCCAATTTGTTAAACAATGAAACTTTGGTGGATGTAACATTAGCTGCTGAAGGCAGACATCTTCAAGCACATAAAGTTGTATTATCTGCATGTAGCACATATTTTCAATCTCTGTTTACTGTGAATCCATGTCAACATCCGATTGTTATATTGAAAGATGTCAAATTTTCTGATTTAAAGATCATGGTTGATTTTATGTACTATGGTGAAGTAAATATATCACAGGATCAATTACCATCAATAATAAAGACTGCAGAAAGCTTGAAAATAAAGGGACTCGCAGAAATGCATACTGCTTCTCTAACAAAATGGCCAAGTGGTAGTAGTGAACCTGGAGGAGGAGATCGTGGAGAATCTTGTTCACCTAGTCCTTCTCCATTATCACCATCTTTCCGTAGAAAAAGATTAAGGAAGTCATCTACCGGATCAACATCTGGATCTGGAGATAAACCAGAagaaatgaatgaaattaCTTTGGTTGCTACTAATATTGTAAAACCAGAACCATTAATAGTTTCTCAAGAAGGCAGTGAAAATTTAAGAAGACCTGTTAATACCAGTACTGAATCTCAAGGAAGCATTGACGAAGATCAAATAtcaattatgAGTAACATGGAAAACAGTTCAGCAACGACACCAGCGCAAAGTGATGGTTCGATACAAGATGTGAGTCAACAATCAGGAGGAAATGTGGCACAGAGTTCAGTTTCTTCACAACCACCTGCACATCAAGGATTGCAATGGACTATTATGGAGCATACATATCCACGTTTCGCTCTGTCCTCGTGTCAAACGAATCTGTCGATCCAAGCGTCATCAGCTTTTACCACGCCCGAAATAACAGCTTCTTCGACCATCAGCGATCAGTACTCTGGTACCAGCACGACTGGTTCTAGTTGCGCCTTGACGAATTACCCGAATTCCTCACACGGGACGTTGCAGCACGCATCGTCAAGTGGCCCTTCACCGTCGGCACAGTGTCCGAGTAACTGTCAGAGCCCGTGCGCCAGTCCGCAGACCGCAATAAAGAGGAAACGATCGACAAATCCGCAAGCAGATGAGAACTTTATCAGGGCGTTGGACGCCGTACGATACGGTGGCATAGGGTTCTGTAAAGCAGCCAGGATGTTCGGTGTAAACAATCGAACACTTTGGCTGGAGTACAAAAAGCGCGGTTACCCGAACAATCGACCCAGCTTGAAATCGAGGGTCAAGCAAGAAGTAAATTCCTCGCCACCGCCAGCCCCATCTGCGCAGCCGGTTAATTCGCAGAGCCCTACGCCAATGGGACCCCCCACCACTCCGCACAGTACACACAATACCCACAGCACGCATACCATGCTGACCACTCATAGTCCTCATACGATGTTAAGCGGTTACATCGATAGTAGGCATACGGATTACGCGTTGCCGAGCACCACAATGCCAATTAATTTACACGGTGTTAACTACAACGCAATGTGA
Protein Sequence
MSMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNISQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSGSSEPGGGDRGESCSPSPSPLSPSFRRKRLRKSSTGSTSGSGDKPEEMNEITLVATNIVKPEPLIVSQEGSENLRRPVNTSTESQGSIDEDQISIMSNMENSSATTPAQSDGSIQDVSQQSGGNVAQSSVSSQPPAHQGLQWTIMEHTYPRFALSSCQTNLSIQASSAFTTPEITASSTISDQYSGTSTTGSSCALTNYPNSSHGTLQHASSSGPSPSAQCPSNCQSPCASPQTAIKRKRSTNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSLKSRVKQEVNSSPPPAPSAQPVNSQSPTPMGPPTTPHSTHNTHSTHTMLTTHSPHTMLSGYIDSRHTDYALPSTTMPINLHGVNYNAM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00729213;
90% Identity
iTF_01424456; iTF_00084449; iTF_00086402; iTF_00084646; iTF_00086094; iTF_00087855; iTF_00087024; iTF_00087281; iTF_00085205; iTF_00085493; iTF_00088917; iTF_00088701; iTF_00088126; iTF_00217153; iTF_00219716; iTF_00225156; iTF_00231236; iTF_00231397; iTF_00219878; iTF_00228582; iTF_00225319; iTF_00222441; iTF_00227881; iTF_00215628; iTF_00215788; iTF_00218508; iTF_00222605; iTF_00226514; iTF_00228050; iTF_00220500; iTF_00226676; iTF_00228756; iTF_00219031; iTF_00220663; iTF_00227353; iTF_00227195; iTF_00219196; iTF_00229948; iTF_00221182; iTF_00221342; iTF_00230110; iTF_00214943; iTF_00215103; iTF_00216992; iTF_00218336; iTF_00223105; iTF_00223277; iTF_00224473; iTF_00224634; iTF_00294593; iTF_00293636; iTF_00293832; iTF_00293066; iTF_00294385; iTF_00292858; iTF_00291452; iTF_00291647; iTF_00770469; iTF_01475366; iTF_01130729; iTF_01475562; iTF_01130924; iTF_01473837; iTF_01199505; iTF_00770290; iTF_01198771; iTF_01474040; iTF_01198585; iTF_01199323; iTF_01235105; iTF_01234947; iTF_01233740; iTF_01234426; iTF_01234267; iTF_01233567; iTF_00866626; iTF_00860484; iTF_00861796; iTF_00862661; iTF_00865925; iTF_00865414; iTF_00762471; iTF_00861256; iTF_00762636; iTF_00860302; iTF_00864558; iTF_00763313; iTF_00862481; iTF_00763154; iTF_00866098; iTF_00865235; iTF_00864727; iTF_00863192; iTF_00863353; iTF_00861978; iTF_00861051; iTF_00864059; iTF_00024700; iTF_00024541; iTF_00863871; iTF_00866784; iTF_00360132; iTF_00360296; iTF_00360986; iTF_00360828; iTF_00963108; iTF_00963276; iTF_00961744; iTF_00961911; iTF_00217669; iTF_00217826; iTF_00295365; iTF_00296905; iTF_00296690; iTF_00295161; iTF_00183206; iTF_00183364; iTF_01065478; iTF_01066342; iTF_01068204; iTF_01066163; iTF_01065652; iTF_01068376; iTF_01070279; iTF_01067691; iTF_01070444; iTF_01067534; iTF_00253481; iTF_00254441; iTF_00255182; iTF_00252175; iTF_00253681; iTF_00251986; iTF_00254997; iTF_00252919; iTF_00252731; iTF_00254237; iTF_00292201; iTF_00292355; iTF_00225996; iTF_00225832; iTF_01066862; iTF_01067022; iTF_01068893; iTF_01069056; iTF_00303185; iTF_00302948; iTF_01122354; iTF_01513394; iTF_01512260; iTF_01512109; iTF_01513558; iTF_00773716; iTF_00773905; iTF_00393685; iTF_00393517; iTF_01069749; iTF_01069574; iTF_00183863; iTF_00184020; iTF_00983672; iTF_00983536; iTF_00223961; iTF_00223792; iTF_00229273; iTF_00229430; iTF_01090074; iTF_01089914; iTF_00140668; iTF_00140505; iTF_00216476; iTF_00216307; iTF_00391420; iTF_00391213; iTF_00633724; iTF_00633550; iTF_00233310; iTF_00233148; iTF_00117919; iTF_00118089; iTF_01169087; iTF_01169259; iTF_01419071; iTF_01418920; iTF_00962592; iTF_00962425;
80% Identity
iTF_01424456;