Ospi010738.1
Basic Information
- Insect
- Odynerus spinipes
- Gene Symbol
- lola
- Assembly
- GCA_032403825.1
- Location
- JAIFRP010004357.1:3304872-3308252[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-16 4.4e-13 48.5 0.0 2 42 376 417 375 430 0.95 2 2 3.3 3.1e+03 -2.3 0.0 25 32 502 509 501 510 0.86
Sequence Information
- Coding Sequence
- ATGTCCATGCAACAATTTTGTTTGCGATGGAACAATCATCAACCAAACTTTATTTCTGTGTtctcaaatttattaaataatgaaacgCTTGTTGATGTGACTTTAGCTGCTGAAGGCAGACACCTTCAAGCGCATAAAGTTGTATTGTCAGCATGTAGTACATACTTCCAATCGTTATTTACTGTAAACCCATGCCAACATCCAATTGTTATACTTAAAGATGTGAAATTTTCTGATCTCAAAATTATGGTAGATTTTATGTATTATGGAGAAGTTAATATTTCTCAAGATCAGTTACCATCGATTATTAAAACAGCAGAAAGTTTGAAGATCAAGGGTCTTGCAGAAATGCATACAGCTTCGTTGACTAAATGGCCAAGTAGTAGTAGTGAACAAGGAGGTGGGGATCGTGGGGAGTCTTGTTCACCTAGTCCATCTCCCCTTTCTCCATCCTTTAGACGAAAGAGATTAAGAAAAACATCAACAGGATCAACGTCTGGATCTGGAGACAAAACAGAAGAAATTAACGAGATAACCTTGGTTGCTACCAATGTTGTAAAACCTGAACCATTAATTGTATCTCAAGAAAGTAGTGAAAATGTAAGGCGGCCGGTAAACACTAGTACAGAATCACAAGGAAGTATCGACGAAGATCAAATATCGATTATGAGCAATATGGAGAATAGTTCTACAACAATGCCAGCGCAAAGTGACAATACAATACAAAATGTGAACCAACAATCGAGTGCAAATGTAGCACAAAGTTCTGTTTCCTCTCAACCTCCAGCACATCAAGGATTACAATGGACTATTATGGAGCACACATATCCACGTTTCGCTCTGTCCTCGTGTCAAACGAATCTGTCGATCCAAGCGTCATCAGCGTTTACAACGCCTGAAATAACAACTTCTTCAACGATCAGCGATCAGTACTCTGGTACCAGCACCACTGGTTCCAGTTGTGCCCTGACGAATTATCCAAACTCCTCCTCGCATGGGACGTTACAGCATACATCATCGTCGAGCGCTCCTACGCCATCAACCCAGTGTCCCAGTAACTGCCAGAGTCCTTGCGCCAGTCCGCAGACCGcgattaaaaggaaaagatcaACGAATCCGCAAGcggatgaaaattttattagagCTCTCGATGCTGTGCGATACGGTGGTATAGGCTTTTGTAAGGCTGCCAGAATGTTCGGTGTTAATAATCGAACACTTTGGCTCGAGTACAAGAAGCGTGGTTATCCGAATAATCGACCTAGCTTAAAGTCAAGAGTGAAACAAGAAGTTAATTCCTCGCCGCCACCGACTCAATCGGCGCAGCCTGTTAATTCGCAAAGTCCGACACCCATGGGTCCACCTTCGACTCCACACAGTACACACAATACTCACAGTACTCATACTATGTTAACCACTCATAGTCCTCACACCATGTTAAGCGGTTACATCGATAGCAGGCATACAGACTATGCACTCCCGAGCACTACGATGCCAATTAATTTGCACGGCGTTAATTACAACACCATGTGA
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNISQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSSSSEQGGGDRGESCSPSPSPLSPSFRRKRLRKTSTGSTSGSGDKTEEINEITLVATNVVKPEPLIVSQESSENVRRPVNTSTESQGSIDEDQISIMSNMENSSTTMPAQSDNTIQNVNQQSSANVAQSSVSSQPPAHQGLQWTIMEHTYPRFALSSCQTNLSIQASSAFTTPEITTSSTISDQYSGTSTTGSSCALTNYPNSSSHGTLQHTSSSSAPTPSTQCPSNCQSPCASPQTAIKRKRSTNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSLKSRVKQEVNSSPPPTQSAQPVNSQSPTPMGPPSTPHSTHNTHSTHTMLTTHSPHTMLSGYIDSRHTDYALPSTTMPINLHGVNYNTM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00963108;
- 90% Identity
- iTF_01424286;
- 80% Identity
- iTF_01090074;