Basic Information

Insect: Temnothorax unifasciatus
Gene Symbol: -
Assembly: GCA_030770225.1
Location: JASTWK010000214.1:200578-203967[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.0062 0.98 11.2 3.8 1 23 22 45 22 45 0.96

2 20 1.4e-05 0.0022 19.5 0.5 1 23 51 73 51 73 0.97

3 20 0.0048 0.76 11.6 4.4 1 23 79 101 79 101 0.98

4 20 0.00036 0.058 15.1 1.5 1 23 107 129 107 129 0.98

5 20 8.4 1.3e+03 1.4 8.1 1 23 135 157 135 158 0.96

6 20 0.00011 0.018 16.7 2.6 1 23 174 197 174 197 0.95

7 20 0.77 1.2e+02 4.6 0.8 3 23 208 228 206 228 0.95

8 20 5e-07 8e-05 24.1 1.2 1 23 234 256 234 256 0.98

9 20 2.1e-05 0.0033 19.0 1.8 1 23 262 284 262 284 0.97

10 20 3.8e-07 6e-05 24.5 0.7 1 23 290 312 290 312 0.99

11 20 0.4 63 5.5 0.5 2 23 348 370 347 370 0.96

12 20 0.00011 0.017 16.8 1.0 1 23 376 399 376 399 0.97

13 20 0.64 1e+02 4.9 0.4 3 23 406 427 405 427 0.96

14 20 0.0001 0.017 16.8 0.2 1 23 433 455 433 455 0.98

15 20 0.047 7.4 8.5 0.3 2 23 462 484 461 484 0.94

16 20 2.2e-05 0.0036 18.9 2.1 1 23 504 527 504 527 0.96

17 20 0.0027 0.42 12.4 0.1 1 23 538 560 538 560 0.95

18 20 0.005 0.8 11.5 4.0 1 23 566 588 566 588 0.97

19 20 6.4e-07 0.0001 23.8 1.1 1 23 594 616 594 616 0.98

20 20 2.2e-05 0.0035 18.9 0.1 1 21 622 642 622 643 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.0062	0.98	11.2	3.8	1	23	22	45	22	45	0.96
2	20	1.4e-05	0.0022	19.5	0.5	1	23	51	73	51	73	0.97
3	20	0.0048	0.76	11.6	4.4	1	23	79	101	79	101	0.98
4	20	0.00036	0.058	15.1	1.5	1	23	107	129	107	129	0.98
5	20	8.4	1.3e+03	1.4	8.1	1	23	135	157	135	158	0.96
6	20	0.00011	0.018	16.7	2.6	1	23	174	197	174	197	0.95
7	20	0.77	1.2e+02	4.6	0.8	3	23	208	228	206	228	0.95
8	20	5e-07	8e-05	24.1	1.2	1	23	234	256	234	256	0.98
9	20	2.1e-05	0.0033	19.0	1.8	1	23	262	284	262	284	0.97
10	20	3.8e-07	6e-05	24.5	0.7	1	23	290	312	290	312	0.99
11	20	0.4	63	5.5	0.5	2	23	348	370	347	370	0.96
12	20	0.00011	0.017	16.8	1.0	1	23	376	399	376	399	0.97
13	20	0.64	1e+02	4.9	0.4	3	23	406	427	405	427	0.96
14	20	0.0001	0.017	16.8	0.2	1	23	433	455	433	455	0.98
15	20	0.047	7.4	8.5	0.3	2	23	462	484	461	484	0.94
16	20	2.2e-05	0.0036	18.9	2.1	1	23	504	527	504	527	0.96
17	20	0.0027	0.42	12.4	0.1	1	23	538	560	538	560	0.95
18	20	0.005	0.8	11.5	4.0	1	23	566	588	566	588	0.97
19	20	6.4e-07	0.0001	23.8	1.1	1	23	594	616	594	616	0.98
20	20	2.2e-05	0.0035	18.9	0.1	1	21	622	642	622	643	0.96

Sequence Information

Coding Sequence: atgcatattttattatcctcCCCTTCTTTCAGGCAACGACGGGGAGGTAGATTGCGCGCCATGCACCAATGCGTCAAGTGCGGGGCTCGTTTCCGTCACACGCGAAAGCTCGTGGAGCACCTGAAGAACCTGCACAACATCGACCGGGCGTTCAGCTGCGACGAGTGCAACAAGACGTTTCGCAGCCCGATGAACATAGCTCGTCACAAACTGATCCACACGGGGCTGAAAGCGTTCACCTGCGATCTCTGCGAGTACAGCACCAATCAGAAGTCGAATCTGGAGTGCCATCGTCGACGGCACGCGAAGGACTACAGCTTCAAGTGCGAGACGTGCGGCAGAGGCTTTTTCCACAGGGCCGAGTACCTGGACCACCAGAACGCGCACACGAACAAGCGTCTGTATCGTTGCGAGCACTGCTGCAAGAATTACCTGTACAAGAAGAACCTGTCGGTGCACCTGGTGACGCATCACGCCGGCAAACATGCCGCCGCGGTCACGAGGAGCGCGAGGACCAGGCACGCGTGCAAGTTCTGCCCGGAGAGATTCGTGTACAAGAGGCTGCTGGAGAGGCACATGAAGAACCAGCACGGATTCGCGGACGCGCGAGCGAAGCACCTGTGCGATCTGTGCGGCGCGGAACTGTCGTCGATGAGACGACTGCTGGTGCACAAACGCAATCACGCGGGCGAGAGGATCTTCGAGTGCGACACGTGCGACAAGAGGTTCGCCAGCAAGGAGAATCTGAGCATTCACAAGCGGACGCACACCGGCGACAAGCCGCACGTGTGCCAGCAGTGCGGCCGCGGTTTCACGCAGAGGACATCCCTGGTCCTGCATCTGCGGTACCACTCGGATCAGAGGCCTTACCAGTGCTTGGACTGCGGCAAGGGATTCGTGTCCAACACCTTACTCAAGAGGCATCGCAAAGTGCACGAGAAGATCGTGCAGCCGAAGCTCCAGTGGACAAATAATCACGATTTGAAGGTGAAGAATGAGGACCTACCTGATCTTGGACAAAAATTCGAAGGTGGCGAGAAGGTCTGCGAGCTGTGCCAGGCAAAATTTCACTTTGTTACCAGACTGGTCGCGCACCTGAGAATAGCGCACGGCATCCTTCGGCCCTTTAAGTGCGTAACCTGCGACAAGAATTATCCCCAGCAGTTCATGCTTAACGCCCACGTGAAGAAATCGCACACGCCGAAGACCGCGCCGTGTAACCAGTGCAGCTTCATGGGTGTCAACGTGACCGACGTGGAGAGGCACAGGCGGCGACGTCACCGAGCCCCGCCGAAATTCACGTGCGAGATTTGCAGCCAGGATTTCGCCGATAAGGACACTCTGGTCGCGCACACGACGATGCACGACTTCATGCAGTATCAGCGATGCAACGCGTGCGGCAGCATCTTCAACGATGTGTACAGCTTGAAGGAACACAATCGTCTCTACCACTACGATCCTGCGTCGGACGAGAAGTCGTTCGAGGAGCCCAGCGAGAACGAGTCCGAGCACAAATGCGACGTTTGCGGCAGGGCCTACAAGTATAAGTCGATGCTGAAGCAGCACAAGATCAGAGCTCACGGTGACCAGTCGAACCACGAGAGGCGCAGGTACCTTTGCGCGCTGTGCGGCAAGGAGTTGAAGACGGCGAAGGGCCTCGAAATCCACAACAGATCGCACACCGGCGAAAAGCCGTATACTTGCGAGGTGTGCGGCAAGTGTTTCGCCTGTGAGACCCTGTTGAGGACCCACAAAGTCACCCACACCGGAGAAAGGAAGTACTCGTGCGACCAATGCGGCAAGGCTTTCACGCAGAGGTCCACTCTGGTTGTTCACAAGCGATATCACACGGGCGAACGACCGTACGTTTGTCCTCGATGCGGTAAGGGCTTTGTCACACGAACTGTCCTTAATACTCACATGAAGTCCTGTCGTTGA
Protein Sequence: MHILLSSPSFRQRRGGRLRAMHQCVKCGARFRHTRKLVEHLKNLHNIDRAFSCDECNKTFRSPMNIARHKLIHTGLKAFTCDLCEYSTNQKSNLECHRRRHAKDYSFKCETCGRGFFHRAEYLDHQNAHTNKRLYRCEHCCKNYLYKKNLSVHLVTHHAGKHAAAVTRSARTRHACKFCPERFVYKRLLERHMKNQHGFADARAKHLCDLCGAELSSMRRLLVHKRNHAGERIFECDTCDKRFASKENLSIHKRTHTGDKPHVCQQCGRGFTQRTSLVLHLRYHSDQRPYQCLDCGKGFVSNTLLKRHRKVHEKIVQPKLQWTNNHDLKVKNEDLPDLGQKFEGGEKVCELCQAKFHFVTRLVAHLRIAHGILRPFKCVTCDKNYPQQFMLNAHVKKSHTPKTAPCNQCSFMGVNVTDVERHRRRRHRAPPKFTCEICSQDFADKDTLVAHTTMHDFMQYQRCNACGSIFNDVYSLKEHNRLYHYDPASDEKSFEEPSENESEHKCDVCGRAYKYKSMLKQHKIRAHGDQSNHERRRYLCALCGKELKTAKGLEIHNRSHTGEKPYTCEVCGKCFACETLLRTHKVTHTGERKYSCDQCGKAFTQRSTLVVHKRYHTGERPYVCPRCGKGFVTRTVLNTHMKSCR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00869051;
90% Identity: iTF_01407570; iTF_01405942; iTF_00129922; iTF_00126901; iTF_00129176; iTF_00128412; iTF_00127648; iTF_01408466; iTF_01423828; iTF_01421708; iTF_01422380; iTF_00885324; iTF_00765829; iTF_01423084;
80% Identity: -