Smon016067.1
Basic Information
- Insect
- Scaptomyza montana
- Gene Symbol
- -
- Assembly
- GCA_018904305.1
- Location
- JAEIGR010000001.1:12947013-12947985[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.3 6.2e+03 -2.2 0.0 7 7 81 81 45 104 0.60 2 3 2.2e-11 6.1e-08 33.1 0.0 11 89 134 202 127 202 0.85 3 3 5.2 1.4e+04 -3.4 0.0 77 84 254 261 244 266 0.71
Sequence Information
- Coding Sequence
- ATGCACAATCCTCGAGAGCATTTACAGTGCAGGAGAAAAGGCTGCACTTACACCACTAACAGGGCGTACAATCTAGAGCGCCATGAGCGCAACCACGAGAAGGGCAAGGTGCTAGTATCACAATGCCAACCATGTCCACATTGCACATATGCCGCTGGATCGCTACATAATTTAATGCGGCACATAAACAAAAAACATGCAGCACTAAGTGAAGAAACCAAGCAATTGCCCATAACTAGCCAAAAATTGGAGCAGCAACATGAACCACCTTCAACGGAGATAAAGTCTATGCCTAAAGCAGAACCAAGTCCGGAGCAGGAGCGCCCAGTGCATGAACCTGTAAATCAAGCGTCTGATTCATCGCTTTGGTTTTGGAGTACGCCGCAGCAAATGGAGAAGAATTTTTTAAGACGTAGTGGTCTACATTCTGAATGCAAAATAAAAGAGATTTCAATCAAGCTGTACAAATTTTATGCTTTGGTGAGAGCAAGAGGAGGGGCTTTAAATGTGGACAAATGGGATGATGTTGCTGCAGCCCTGGGCTTGCCGACGGGATCAGGCTGTCAGACACGCGTTAAGTACATGGAGCTACTATACGAGTTCGAGAAGAAAGAGGATGAGCGTTTGCAAGAGTGCCAGAATGCGAAAGGAGTGCCATATTGGTGGGATGATGGCGATTTCATCACAGACAACATCGCATCCGGCGATGAGCAGTGGAAGAACGTGGATTGTCCATCTCCAACAGTTCGCAATGTCATTGTTAAAATGATTTATGAAAAGTATTATACGAAGCATTTAAGTACCTGCAAACCATTCCAAAGGTTTAATGTGAAGGATTCCTGGCTCAGGGCAACAATGTTGAATTATCAAGCGCTGAGATGTGAAATGCATTTGATGCATTATTCCGTTCCTTGA
- Protein Sequence
- MHNPREHLQCRRKGCTYTTNRAYNLERHERNHEKGKVLVSQCQPCPHCTYAAGSLHNLMRHINKKHAALSEETKQLPITSQKLEQQHEPPSTEIKSMPKAEPSPEQERPVHEPVNQASDSSLWFWSTPQQMEKNFLRRSGLHSECKIKEISIKLYKFYALVRARGGALNVDKWDDVAAALGLPTGSGCQTRVKYMELLYEFEKKEDERLQECQNAKGVPYWWDDGDFITDNIASGDEQWKNVDCPSPTVRNVIVKMIYEKYYTKHLSTCKPFQRFNVKDSWLRATMLNYQALRCEMHLMHYSVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01321704; iTF_01322427; iTF_01326178; iTF_01326950; iTF_01325448; iTF_01324686; iTF_01327676; iTF_01320977; iTF_01323165; iTF_01320256;
- 90% Identity
- iTF_01321704; iTF_01322427;
- 80% Identity
- -