Scyr009867.1
Basic Information
- Insect
- Scaptomyza cyrtandrae
- Gene Symbol
- -
- Assembly
- GCA_035044605.1
- Location
- JAWNNS010000640.1:14736187-14737164[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-11 8.8e-08 32.5 0.0 10 89 133 202 129 202 0.85 2 2 1.9 5.2e+03 -2.0 0.0 74 84 253 263 230 268 0.66
Sequence Information
- Coding Sequence
- ATGCACAATCCGCGAGAGCACCTGCGATGCAAGAGAAAAGGCTGCATATACACCACAAACAGAGCTTACAATCTAGAGCGGCATGAGCGCAACCACGACAAGGGCAAGGTGCTAGTATCGCAATGCCAACCATGTCCACATTGCACATATGCCGCCGGATCGCTTCACAATTTAATGCGGCACATTAGCAAAAAACACGCAGCACTGGGTGGAAAAGCAAAACAGTTGCCTACAACAAGCCAACAAGTGGAGCAACAACACGAAGCACCTTCAACGGAAAACAAGTCGATGCCTAAAGCAGAACCAAGTCCGGAGCAGGGGCGCCTAGTGGAAAAATCAGTAGACCAAGTGACAAATTCATCGCTTTGGTTTTGGAATACGCCACAGCAAACGGAAAAGAATTTTTTGAGACGTAGTGGCCTGCAGTccgaatataaaataaaagacagGTCATTTAAGCTCTACAAATTTTATGCTTTGGTTAGAGCAAGAGGAGGCGCTTTAAATGTGGACCGATGGGATGATGTGGCTGCAGCCCTTGGCCTGCCGACAGGATCAGCCTGTCAAacacgcgtaaagtatatggaGCTGCTGTTCGATTTTGAGAAGAAAGAGGAAGAACGTTTGCGAGAGTTTCAGAATGCGACAGGGGTGCCATATTGGTGGGATGATGGTGATTTTATCACGGACAACATGAATTTCTCATCCGGCGATGAACAGTGGAAAAACGTAGATTGTCCATCTGCAACGGTTCGCAATGCCATTgttaaaatgatttatgaaAAGTATTATACGAAGCATTTGAAAATCTGCAAACCATTTCAAAAGTTCCTTGTGAAGGATTCCTGGCTTAGGGCAACAATGTTAAATTATCAAGCGCTAAGGtgtgaaatgcattttatgcATCTTTATGTTCCTTGA
- Protein Sequence
- MHNPREHLRCKRKGCIYTTNRAYNLERHERNHDKGKVLVSQCQPCPHCTYAAGSLHNLMRHISKKHAALGGKAKQLPTTSQQVEQQHEAPSTENKSMPKAEPSPEQGRLVEKSVDQVTNSSLWFWNTPQQTEKNFLRRSGLQSEYKIKDRSFKLYKFYALVRARGGALNVDRWDDVAAALGLPTGSACQTRVKYMELLFDFEKKEEERLREFQNATGVPYWWDDGDFITDNMNFSSGDEQWKNVDCPSATVRNAIVKMIYEKYYTKHLKICKPFQKFLVKDSWLRATMLNYQALRCEMHFMHLYVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01323897;
- 90% Identity
- iTF_01327676;
- 80% Identity
- -