Scal000674.1
Basic Information
- Insect
- Scaptomyza caliginosa
- Gene Symbol
- -
- Assembly
- GCA_035044725.1
- Location
- JAWNNR010000036.1:646117-647099[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6 2.9e+03 -1.4 0.0 33 57 55 89 31 107 0.61 2 3 4.3e-12 7.8e-09 35.7 0.0 10 89 134 203 130 203 0.87 3 3 1.4 2.6e+03 -1.2 0.1 73 84 253 264 233 271 0.57
Sequence Information
- Coding Sequence
- ATGCACAATCCTCGAGAGCACCTTCGGTGCAGAAGAAAAGGCTGCACATACACCACAAACAGGGCGTACAATCTAGAGCGACATGAGCGCAACCACGACAAGGGCAAGGTGCTAGTGTCGCAATGCCAACCATGTCCCCATTGCACATATGCTGCTGGATCGCTACACAACTTAATGCGGCACATAGGTAAAAAGCACGCAGGACTTGACGAAAAAACcaagcaattggcaattgcaaatCAACAAGCCAACAAGCAATGGCATGAAACAACTGTAACAGAGCAGGAATCCATGCCTAGCGCACAACTTAGTCCGCAGCAAGAGCGTCCAGTGCAAATACGTCtagaacaaacaaaagattCATCGCTTTGGTTTTGGAGTACGCCACAGCAAATGGAGAAGAATTTTTTAAGGCGTAGTGGTCTGCCAAccgaatacaaaataaaagagcgATCAATTAAGCTGTTCAAATTTTATGCATTGGTCAGCGCAAGAGGAGGTGCTTTAAACGTGGATCAATGGGATAATGTTGCTGCAGCCCTGGGCCTACCGACAGGATCAGGGTGTCAGACACGCGTCAAGTACATGGAGTTGTTGTACGAGTTTGAGAAGAAAGAAGAACAACGTTTGCAAGAGTGTCGGAATGCAAAAGGTGTGCCACATTGGTGGGATGATGGAGATTTCATTACAGACAGCACGAATTTGACATCCAGTGATGAAGAGTGGAAAACCGTGTATTGTCCAACTACATCTGTTCGCAATAGCGTtgtgaaaataatttatgaaaagtATTATACAAAGCATTTGAGTACCTGCAAACTATTCCAACGGTTTCATGTAAAGGATTCGTGGCTTAGGGCAACAATGTTAAATTATCAAGCGTTAAGGtgtgaattgcatttaatgcacTCTTCGGTTCCTTAA
- Protein Sequence
- MHNPREHLRCRRKGCTYTTNRAYNLERHERNHDKGKVLVSQCQPCPHCTYAAGSLHNLMRHIGKKHAGLDEKTKQLAIANQQANKQWHETTVTEQESMPSAQLSPQQERPVQIRLEQTKDSSLWFWSTPQQMEKNFLRRSGLPTEYKIKERSIKLFKFYALVSARGGALNVDQWDNVAAALGLPTGSGCQTRVKYMELLYEFEKKEEQRLQECRNAKGVPHWWDDGDFITDSTNLTSSDEEWKTVYCPTTSVRNSVVKIIYEKYYTKHLSTCKLFQRFHVKDSWLRATMLNYQALRCELHLMHSSVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01323897;
- 90% Identity
- -
- 80% Identity
- -