Sfla004611.1
Basic Information
- Insect
- Scaptomyza flava
- Gene Symbol
- -
- Assembly
- GCA_003952975.1
- Location
- RKRM01000280.1:32298-33502[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.7 4.9e+03 -2.1 0.0 7 9 81 83 45 107 0.62 2 3 4.6e-11 8.4e-08 32.4 0.0 11 89 134 202 127 202 0.85 3 3 4.4 8e+03 -2.8 0.0 77 84 254 261 237 266 0.66
Sequence Information
- Coding Sequence
- ATGCACAATCCTCGAGAGCATTTACAGTGCAGGAGAAAAGGCTGCACTTACACCACTAACAGGGCGTACAATCTAGAGCGCCATGAGCGCAACCACGAGAAGGGCAAGGTGCTAGTATCACAATGCCAACCATGTCCACATTGCACATATGCCGCCGGATCGCTACATAATTTAATGCggcacataaacaaaaaacatgcaGCACTAAGTGAAGAAACCAAGCAACTACCCATAACTAGCCAAAAACTGGAGCAGCAACATGAACCACCTTCAACGGAGATAAAGTCTGTGCCTCAAGCAGAACCAAGTCCGGAGCAGGAGCGCCCATTGCATAAACCAATAGAACAAGCGACTGATTCATCGCTTTGGTTTTGGAGTACGCCGCAGCAAATGGAGAAGAATTTTTTAAGACGTAGTGGTCTACATTCTGAATGTAAAATAAAGGAGATTTCAATCAAGCTGTACAAATTTTATGCTTTGGTGAGAGCAAGAGGAGGGGCTTTAAGTGTGGACAAATGGgatgatgttgctgcagcCCTGGGCCTGCCGACGGGATCAGGCTGTCAGACACGCGTTAAGTACATGGAGCTACTATACGAGTTCGAGAAGAAAGAGGATGAACGTTTGCAAGAGTGCCAGAATGCGAAAGGAGTGCCATATTGGTGGGATGATGGCGATTTCATCACAGACAACATCGCATCCGGTGATGAGCAGTGGAAGAACGTAAATTGTCCATCTCCAACAGTTCGCAATGTCATTGTTAAAATGATTTATGAAAAGTATTACACAAAGCATTTAAGTACCTGCAAACCATTCCAAAGGTTTATTGTAAAGGATTCCTGGCTCAGGGCAACAATGTTGAACTATCAAGCGCTGAGATGTGAAATGCATTTGATGCATTATTCCGTTCCTTGA
- Protein Sequence
- MHNPREHLQCRRKGCTYTTNRAYNLERHERNHEKGKVLVSQCQPCPHCTYAAGSLHNLMRHINKKHAALSEETKQLPITSQKLEQQHEPPSTEIKSVPQAEPSPEQERPLHKPIEQATDSSLWFWSTPQQMEKNFLRRSGLHSECKIKEISIKLYKFYALVRARGGALSVDKWDDVAAALGLPTGSGCQTRVKYMELLYEFEKKEDERLQECQNAKGVPYWWDDGDFITDNIASGDEQWKNVNCPSPTVRNVIVKMIYEKYYTKHLSTCKPFQRFIVKDSWLRATMLNYQALRCEMHLMHYSVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01323897;
- 90% Identity
- iTF_01323897;
- 80% Identity
- -