Stum012012.1
Basic Information
- Insect
- Scaptomyza tumidula
- Gene Symbol
- -
- Assembly
- GCA_035044465.1
- Location
- JAWNNW010000812.1:274139-275117[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.6 8e+03 -2.7 0.0 15 25 68 78 54 97 0.51 2 3 3.8e-11 8.4e-08 32.5 0.0 11 89 134 202 129 202 0.85 3 3 1.4 3.1e+03 -1.4 0.0 73 84 252 263 228 268 0.59
Sequence Information
- Coding Sequence
- ATGCACAATCCGCGAGAGCATCTACGATGCAGGAGAAAAGGCTGCATATACACCACAAACAGAGCTTACAATCTAGAGCGGCATGAGCGCAACCACGACAAGGGCAAGGTGCTAGTATCGCAATGCCAACCATGTCCACATTGCACATATGCCGCTGGATCGCTACACAATTTAATGCGGCACATAAGCAAAAAACACGCAGAACTGGGTGGAAAAGCAAAGCAGTTGCCCACAACAAGCCAACAAGTGGCGCAACAACATGAAGCATCATCGATTGAAAACAAGGCGATTCCTAATGCAGAAGCAAGTCCGGAGCAGGGGCGCTTAGTGGAAAAATCCGTAGACCAAGCGACAAATTCATCGCTTTGGTTTTGGAATACGCCACAGCAAATGGAAAAGAATTTCTTGAGACGTAGTGGCCTACAGTccgaatataaaataaaagatagGTCATTTAAGCTATACAAATTTTATGCTTTGGTTAGAGCAAGAGGAGGTGCTTTAAATGTGGACCGATGggatgatgttgctgcagcCCTTGGCCTGCCGACAGGATCAGCGTGTCAAACACGAGTAAAATATATGGAGCTTCTGTTCGATTTCGAGAAGAAAGAGGAAGAACGCTTGCGAGAGTTTCAGAATGCGACAGGGGTGCCATATTGGTGGGATGATGGTGATTTTATCACAGACAACATGAATTTCTCATCAGACGATGAACAGTGGAAAAACGTAGAGTGTCCATCTGCAACTGTTCAAAATGCCAttgttaaaatgatttatgaaAAGTATTATACGAAGCATTTGAAAATCTGCAAACCATTCCAAAGGTTCCTTGTGAAGGATTCTTGGCTTAGGGCAACTATGTTAAATTATCAAGCGCTAAGGtgtgaaatgcattttatgcaTCTTTATGTTCCTTGA
- Protein Sequence
- MHNPREHLRCRRKGCIYTTNRAYNLERHERNHDKGKVLVSQCQPCPHCTYAAGSLHNLMRHISKKHAELGGKAKQLPTTSQQVAQQHEASSIENKAIPNAEASPEQGRLVEKSVDQATNSSLWFWNTPQQMEKNFLRRSGLQSEYKIKDRSFKLYKFYALVRARGGALNVDRWDDVAAALGLPTGSACQTRVKYMELLFDFEKKEEERLREFQNATGVPYWWDDGDFITDNMNFSSDDEQWKNVECPSATVQNAIVKMIYEKYYTKHLKICKPFQRFLVKDSWLRATMLNYQALRCEMHFMHLYVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01323897;
- 90% Identity
- iTF_01320977;
- 80% Identity
- -