Shsu002000.1
Basic Information
- Insect
- Scaptomyza hsui
- Gene Symbol
- -
- Assembly
- GCA_018152825.1
- Location
- JAECXO010000073.1:13424827-13425797[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-12 1.5e-08 35.0 0.0 11 89 133 201 128 201 0.85
Sequence Information
- Coding Sequence
- ATGCACAATCCTCGAGAGCACCTACGGTGCAGGAGAAAAGGCTGCACGTACACCACAAACAGGGCGTTTAATCTAGAGCGCCATGAGCGCAACCACGATAAGGGCAAGGTGATTATATCGCAATGCCAACCGTGTCCACATTGCACATATGCTGCAGGATCGCTACACAATTTAATGCGGCACATAAGCAATAAACATGCGGCACTGGGTGAAAAAATAAAAGAACTGCCAATTACTAGCCAACCGGTGGAGCAACAACATGAACCACTTTCAACGGAGGAGAAGTCTATGCCTAATGCACAACCAAGTCCAGAGGAGCGCCTAGTGCAAAAACCAGTTGAACAAGCGACAGATTCTTCACTTTGGTTCTGGAGTACACCGCAGCAAATGGAAAAGAATTTTTTAAGACGTAGTGGCCTGCAGTCTGAGTATAAAATAAAGGATAGGTCGATCAAGCTGTATAAATTTTATGCATTGGTGAGAGCAAGAGGAGGTGCTTTAAGTGTGGACCAATGGGACGATGTAGCAGCAGCCTTGGGCTTGCCGACAGGATCAGGCTGTCAGACACGCGTTAAGTACATGGAGTTGTTGTACGAGTTCGAGAAGAAAGAAGAAGAACGTTTGCAAGAGTGTCAGACTGCAAAAGGCGTGCCATATTGGTGGGATGATGGGGATTTCATCAAAGACAACATAAATTTCGCATCCGGCGATGAGCAGTGGAAAAATGAGTATTGTCCATCTGCAATTGTTCGTAATGCCATTGTTAAACTAATTTACGCAAAGTATTATACGAAGCATTTAAACACCTGCAAACCATTTCAACGCCTTCTTGTGAAGGATTCCTGGCTCAGAGCCACAATGTTAAGTTATCAAGCGCTAAGGTGTGAATTGCATTTTTTGCATTGTTCGGCTCCTTGA
- Protein Sequence
- MHNPREHLRCRRKGCTYTTNRAFNLERHERNHDKGKVIISQCQPCPHCTYAAGSLHNLMRHISNKHAALGEKIKELPITSQPVEQQHEPLSTEEKSMPNAQPSPEERLVQKPVEQATDSSLWFWSTPQQMEKNFLRRSGLQSEYKIKDRSIKLYKFYALVRARGGALSVDQWDDVAAALGLPTGSGCQTRVKYMELLYEFEKKEEERLQECQTAKGVPYWWDDGDFIKDNINFASGDEQWKNEYCPSAIVRNAIVKLIYAKYYTKHLNTCKPFQRLLVKDSWLRATMLSYQALRCELHFLHCSAP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01323897;
- 90% Identity
- -
- 80% Identity
- -