Spar011064.1
Basic Information
- Insect
- Scaptomyza parva
- Gene Symbol
- -
- Assembly
- GCA_035044645.1
- Location
- JAWNNT010000134.1:3030510-3031795[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-12 4.9e-09 36.4 0.0 11 89 133 201 128 201 0.86 2 2 1.8 3.5e+03 -1.6 0.0 73 84 249 260 234 265 0.65
Sequence Information
- Coding Sequence
- atgcacaaTCCTCGAGAGCACCTACGGTGCAGGAGAAAAGGCTGCACATACACCACAAACAGGGCGTACAATCTAGAGCGTCATGAGCGCAACCATGACAAGGGCAAGGTGCTGGTATCACAATGCCAACCGTGTCCACATTGCCCATATGCAGCCGGATCGGTGCACAATTTAATGCGGcacataagcaaaaaacaccCAGCACTGAGTGAAAAATCGAAGCAATTGCCTATAACAAGCCAACAAGTAGAGCAAAAACATGTACCACTTTCCCTGGAGAAAAAGTCTATGCCTATTGCAAAACCAAGTTCCAAGCAGGAGCACCTAGTGCAAAAATCCGAAGAGGCGACAGATTCATCGCTTTGGTTTTGGAGTACACCTCAGCAAATGGAGAAGAATTTTTTGAGACGAAGTGGCCTGCAGACCATATGTAAAATAAAGGAAAGGTCAATCAAGCTGTACAAATTTTATGCTTTAGTGAGAGCCAGAGGAGGTGCTTTGAATGTGCATCAATGGGATAATATTGCTGCAGCCTTGGGCCTGCCAACAGGTTCGGGGTGTCAGACACGCGTAAAGTATATGGAGCTGTTGTACGATTTTGAGAAGAAAGAGGAAGACCGTTTAAAACAATGTGTGAACGGAGTACCATACTGGTGGGATGATGGTGATTTCATAACAGACAGTATAAATTTCGCAGCCGGCGATGAGCAGTGGAAAAACGTGAATTGTCCATCGGAAACAGTTCGCAATACCATTGTTAAAATGATTTACGAAAAGTATTATACAAAGCATTTGAGCATATGCAAACCATTTCAACGGTTCCTTGTGAAGGACTCGTGGCTTAGAGCAACCATGTTGAATTATCAAGCTTTAAGGTATCGACTTCCTCTATCGCGCACAACATTGTGA
- Protein Sequence
- MHNPREHLRCRRKGCTYTTNRAYNLERHERNHDKGKVLVSQCQPCPHCPYAAGSVHNLMRHISKKHPALSEKSKQLPITSQQVEQKHVPLSLEKKSMPIAKPSSKQEHLVQKSEEATDSSLWFWSTPQQMEKNFLRRSGLQTICKIKERSIKLYKFYALVRARGGALNVHQWDNIAAALGLPTGSGCQTRVKYMELLYDFEKKEEDRLKQCVNGVPYWWDDGDFITDSINFAAGDEQWKNVNCPSETVRNTIVKMIYEKYYTKHLSICKPFQRFLVKDSWLRATMLNYQALRYRLPLSRTTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01323897;
- 90% Identity
- -
- 80% Identity
- -