Sred003250.1
Basic Information
- Insect
- Scaptomyza reducta
- Gene Symbol
- -
- Assembly
- GCA_035044485.1
- Location
- JAWNNV010000348.1:243617-244589[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-11 5.9e-08 32.9 0.1 11 89 132 200 105 200 0.83 2 2 3.6 6.1e+03 -2.4 0.0 74 84 251 261 230 265 0.67
Sequence Information
- Coding Sequence
- atgcaaaacccTCGAGAGCACCTGCGGTGCAGGAGAAGAGGCTGCATATACACTACAAATAGGGCGTACAATCTCGAGCGGCATGAGCGCAACCACGATAAGGGCAAGGTGCTGGTGTCGCAATGCCAACCATGTCCACATTGCACATATGCCGCCGGATCGCTACACAATTTAATGCGGCACATAAGCAAAAAACACGCAGCACTGGGTGAAAAAGCAAAGCAGTTGCCTATAACAAGCCAACAACTGGAGCAAGACCATGAAACAGCTCAAACCGAAAAGGAGTCGATGACTAATAGAGAACCAAGTCCGGAGCAAGAGCGCTTTGTGGAAAAATTAGTAGAACAAGCGTCATCGCTTTGGTTTTGGAGTACGCCACAACAGATggaaaagaattttttgaGACGTAGTGGCCTGCAGTccgaatataaaataaaagagaagtCATTTAAGCTATACAAattttttgctttggttaGAGCAAGAGGAGGTGCTTTAAATGTCGACCGATgggatgatgttgctgcagctCTGGGCTTGCCGACAGGATCTGCCTGTCAGACACGCGTAAAGTACATGGAGCTGCTGTACGATTTCGAGAAGAAAGAGGAAGAACGTATACGAGAGATTCAGAATGTGAAAGGTGTGCCATATTGGTGGGATGATGGTGATTTTATCACagaaaacatgaatttcgcatcCGGCGATGAACAGTGGAAAAACGTCAACTGTCCATCTGCACCTGTTCGCAATGCCAttgttaaaatgatttatgaaaAGTATTATACGAAGCATTTGAATATCTGCAAACCATTTCAAAGGTTCCTTGTGAAGGATTCCTGGCTTAGGGCAACAATGTTAAATTATCAAGCGCTAAGatgtgaaatgcattttatgcatCGTTTTGTTCCTTGA
- Protein Sequence
- MQNPREHLRCRRRGCIYTTNRAYNLERHERNHDKGKVLVSQCQPCPHCTYAAGSLHNLMRHISKKHAALGEKAKQLPITSQQLEQDHETAQTEKESMTNREPSPEQERFVEKLVEQASSLWFWSTPQQMEKNFLRRSGLQSEYKIKEKSFKLYKFFALVRARGGALNVDRWDDVAAALGLPTGSACQTRVKYMELLYDFEKKEEERIREIQNVKGVPYWWDDGDFITENMNFASGDEQWKNVNCPSAPVRNAIVKMIYEKYYTKHLNICKPFQRFLVKDSWLRATMLNYQALRCEMHFMHRFVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01323897;
- 90% Identity
- -
- 80% Identity
- -