Sgra004501.1
Basic Information
- Insect
- Scaptomyza graminum
- Gene Symbol
- -
- Assembly
- GCA_018901835.1
- Location
- JAEIFL010000290.1:3065673-3066651[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-11 7.1e-08 32.5 0.0 11 89 134 202 129 202 0.85 2 2 3.9 8.4e+03 -3.0 0.0 77 84 256 263 241 268 0.68
Sequence Information
- Coding Sequence
- ATGCACAATCCTCGAGAGCATTTACAGTGCAGGAGAAAAGGCTGCACATACACCACAAACAGGGCGTACAATCTAGAGCGCCATGAGCGCAACCACGATAAGGGCAAGGTGCTAGTATCGCAATGCCAACCATGTCCACATTGCACATATGCCGCCGGATCGGTACATAATTTAACGCGGCACATAAACAAAAAGCATGCAGCACTAAGTGAAGAAACCAAACAACTGCATATAGCTAGCCAAAAAGTGGAGAAGCAACATGAACCACCTACAACGGAGATTAAGTCTATGCCAAATGTTGAACCGAGTCCGAAGCAGGAGCGCCCAGTGCCTAAGCCAGTTGAACAAGCGTCAGAGTCATCGCTTTGGTTTTGGAGTACGCCGCAGCAAATGGAGAAGAATTTTTTAAGACGTAGTGGCCTACATTCTGAATGTAAAATAAAGGAGATTTCAATCAAGCTGTACAAATTTTATGCTATGGTGCGAGCGAGAGGAGGGGCTTTAAATGTGGACAAATGGGATGATGTTGCTGCAGCCCTGGGCCTGCCGGCGGGATCAGGCTGTCAAACACGCGTTAAATACATGGAGTTACTATACGAGTTCGAGAAAAAAGAGGACGAACGTTTGCAAGAGTGCCGTAATGCGAAAGGAGTGCCATATTGGTGGGATGACGGCGATTTCATCACAGACATCACGAATTTCGCATCAGGCGATGAGCAGTGGATGAACGTGAATTGTCCATCTCCAACAGTTCGCAATGTCATTGTTAAAATGATTTATGAAAAGTATTATACGAAGCATTTGAGTACCTGCAAACCATTCCAAAGGTTTAATGTGAAGGATTCCTGGCTCAGGGCAACAATGTTGAATTACCAAGCGCTGAAGTGCGAAATGCATTTGATGCACTATTCCGTTCCTTGA
- Protein Sequence
- MHNPREHLQCRRKGCTYTTNRAYNLERHERNHDKGKVLVSQCQPCPHCTYAAGSVHNLTRHINKKHAALSEETKQLHIASQKVEKQHEPPTTEIKSMPNVEPSPKQERPVPKPVEQASESSLWFWSTPQQMEKNFLRRSGLHSECKIKEISIKLYKFYAMVRARGGALNVDKWDDVAAALGLPAGSGCQTRVKYMELLYEFEKKEDERLQECRNAKGVPYWWDDGDFITDITNFASGDEQWMNVNCPSPTVRNVIVKMIYEKYYTKHLSTCKPFQRFNVKDSWLRATMLNYQALKCEMHLMHYSVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01323897;
- 90% Identity
- iTF_01323897;
- 80% Identity
- -