Spal014544.1
Basic Information
- Insect
- Scaptomyza pallida
- Gene Symbol
- -
- Assembly
- GCA_018152965.1
- Location
- JAECXP010000004.1:6353020-6353986[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-12 3.8e-09 36.8 0.0 11 89 131 199 126 199 0.87 2 2 2.7 7.1e+03 -2.5 0.0 74 84 250 260 236 265 0.65
Sequence Information
- Coding Sequence
- ATGCACAATCCCCGAGAGCACCTACGGTGCAGGAGAAAAGGCTGCACATACACCACAAACAGGGCATACAATTTAGAGCGACATGAACGCAACCATGACAAGGGCAAGGTGCTAGTATCGCAATGCCAACCGTGTCCACATTGCACATATGCCGCCGGATCGCTTCACAATTTAATGCGGCACATAAGCAAAAAGCACGCTGCACTGGATGATAAAACTAAGCAACTGCCTATAACAAGCCGACAAGTCGAGCAACAACATGAACCATCTTCAGTGGAAACGAAGTCGATGCCCAAAGCAGAACCAAGCCCCGAGGAGGAGCGCCCTTCAGTAGAACTTGCAACCGATTCGTCGCTTTGGTTTTGGAGTACACCGCAGCAAATGGAGAAGAATTTCTTAAGACGCAGTGGCTTGCAGTCCGTATGTAAAATAAAGGACAGGTCAATCAAGTTGTTCAAATTTTATGCTTTGGTGCGAGCAAGAGGCGGTGCTTTAAATGTGGACCAATGGGATGATGTTGCTGCAGCCATGGGCCTGCCGACAGGATCAGCCTGTCAGACCCGCGTTAAGTACATGGAGCTGCTGTACGATTTCGAGAAAAAAGAGGAAGAACGCTTGCAAGAGTGTCAGAATGCGGGTGTCGTGCCATATTGGTGGGATGATGGTGATTTCATAACAGACAACATAAATTTCGAATCTTGTGATGAACAGTGGACAAACTCAAATTGTTCACCTGTAACTGTTCGCAATGCAAGTGTTAAAATGATTTACGACAAGTATTATATGAAGCATTTGAATAGCTGTAAACCATTCCAACGATTCCTTGTAAAGGATTCCTGGCTTAGAGCAACAAACTTGACTTATCGAGCGCTAATGTGTGAAATGCATTTAATGCACTATGCTGTTCCTTAA
- Protein Sequence
- MHNPREHLRCRRKGCTYTTNRAYNLERHERNHDKGKVLVSQCQPCPHCTYAAGSLHNLMRHISKKHAALDDKTKQLPITSRQVEQQHEPSSVETKSMPKAEPSPEEERPSVELATDSSLWFWSTPQQMEKNFLRRSGLQSVCKIKDRSIKLFKFYALVRARGGALNVDQWDDVAAAMGLPTGSACQTRVKYMELLYDFEKKEEERLQECQNAGVVPYWWDDGDFITDNINFESCDEQWTNSNCSPVTVRNASVKMIYDKYYMKHLNSCKPFQRFLVKDSWLRATNLTYRALMCEMHLMHYAVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01323897;
- 90% Identity
- -
- 80% Identity
- -