Sleb009776.1
Basic Information
- Gene Symbol
- Bgb
- Assembly
- GCA_003285725.2
- Location
- NW:641914-642923[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-83 3.1e-79 264.0 3.9 1 166 31 192 31 193 0.97
Sequence Information
- Coding Sequence
- ATGATGAACGAAGCTGCTGCACTTGCAAATATGATACCCTACGACACAATAGGGCTGTACGAACAACCAAAGCCCAGATTCATCTTCAAGATGCCGCGCGTTGTGCCCGACCAGAAATCCAAGTTCGAAAGTGATGAGTTGTTTCGACGATTAGGACGCGAAAGCGAGATACGCTACACTGGCTACCGAGAGCGTAGCGTAGAGGAGCGCCAGGTGCGCTTTATGAATGGCTGTCGCGAAGGCCATACAGAGATTTCATTCGTCGCCTCAGGCACCAACCTGCAGCTGGTTTTTAATGCCAACCAGAACCCCTACCTGCACGATAAGGAATGTGATTTTGACAAGGAACACGGTAAAGTGCACATTAAATCGTACTTCATAATGAATGGCGTTTGTGTTCGCTTCCGTGGCTGGCTGGATCTGGAGCGTTTGGATGGTGTAGGCTGCCTGGAGTACGATGAACGTCGCGCCATGCACGAAGATGCAATTTTGCGCGATCAAATCGACCGTTATAACCAGCGGTTGCGTGAATTTGAGGACACCAAGCGAGCCTATCGCGACAACCGCCAAGATGAGATGGAGGCAGTACGACGTGGTGTGGCCTCTGGGGGCATTGGTGTAGGAGCTAGTATGTGGCGACGTTAG
- Protein Sequence
- MMNEAAALANMIPYDTIGLYEQPKPRFIFKMPRVVPDQKSKFESDELFRRLGRESEIRYTGYRERSVEERQVRFMNGCREGHTEISFVASGTNLQLVFNANQNPYLHDKECDFDKEHGKVHIKSYFIMNGVCVRFRGWLDLERLDGVGCLEYDERRAMHEDAILRDQIDRYNQRLREFEDTKRAYRDNRQDEMEAVRRGVASGGIGVGASMWRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00500065; iTF_00504449; iTF_00596419; iTF_01318789; iTF_00618918; iTF_01326154; iTF_00591468; iTF_00507378; iTF_00607574; iTF_00542903; iTF_00592155; iTF_00539423; iTF_00535073; iTF_00541537; iTF_00582721; iTF_00513219; iTF_00552067; iTF_00521924; iTF_00498629; iTF_00481991; iTF_00609640; iTF_00576105; iTF_00573805; iTF_00606829; iTF_00543502; iTF_00570158; iTF_00556976; iTF_00516753; iTF_00558417; iTF_00619601; iTF_00524882; iTF_00548563; iTF_00485621; iTF_00499349; iTF_00521109; iTF_00566549; iTF_00592853; iTF_00494870; iTF_00497910; iTF_00559990; iTF_00542199; iTF_00497144; iTF_00511032; iTF_00615960; iTF_00576825; iTF_00518204; iTF_00501565; iTF_00527805; iTF_00564413; iTF_00597118; iTF_00595711; iTF_00496352; iTF_00590721; iTF_01550753; iTF_00803362; iTF_00474979; iTF_00532131; iTF_00567299; iTF_01322403; iTF_00526340; iTF_01552932; iTF_00520389; iTF_00544229; iTF_00495622; iTF_00600071; iTF_01558791; iTF_00534345; iTF_00572361; iTF_01320233; iTF_01548617; iTF_00502282; iTF_00550698; iTF_00582026; iTF_01557322; iTF_00509579; iTF_01556587; iTF_01321676; iTF_01355884; iTF_00546414; iTF_00599342; iTF_01554446; iTF_00516015; iTF_00553519; iTF_00804943; iTF_00483440; iTF_00490544; iTF_00505872; iTF_00568016; iTF_00804144; iTF_01325424; iTF_00551345; iTF_00547122; iTF_00914258; iTF_00915090; iTF_01570002; iTF_00508083; iTF_00555603; iTF_00915987; iTF_01570003; iTF_00559252; iTF_00479253; iTF_00544981; iTF_00573077; iTF_01550037; iTF_00554838; iTF_00562230; iTF_00831894; iTF_01552214; iTF_01558038; iTF_00472824; iTF_00918808; iTF_01551481; iTF_00530714; iTF_00587162; iTF_00472123; iTF_00916955; iTF_00359229; iTF_00500797; iTF_00613949; iTF_00616669; iTF_01555197; iTF_00493406; iTF_00508862; iTF_00519678; iTF_00540126; iTF_00562942; iTF_00577534; iTF_01559518; iTF_00512479; iTF_00549311; iTF_00595007; iTF_00917823; iTF_01553727; iTF_00476384; iTF_00556320; iTF_00560800; iTF_00584192; iTF_00603840; iTF_00802592; iTF_00805728; iTF_00603841; iTF_00503010; iTF_00611821; iTF_00523440; iTF_00554839; iTF_00618105; iTF_00618106; iTF_00570875; iTF_00570876; iTF_00503011; iTF_00611822; iTF_00523441; iTF_01323873; iTF_00245154; iTF_00211396; iTF_01265547; iTF_00246102; iTF_00251106; iTF_01195042; iTF_00062502; iTF_00890730; iTF_00061684; iTF_01363700; iTF_00889886; iTF_01195774; iTF_00060863; iTF_00324066; iTF_00517474; iTF_00480643; iTF_00481316; iTF_00494148; iTF_00532868; iTF_00561509; iTF_00545734; iTF_00579751; iTF_00538728; iTF_00550025; iTF_00603113; iTF_00602346; iTF_00563659; iTF_00471372; iTF_00491276; iTF_00574573; iTF_00505166; iTF_00535822; iTF_00581294; iTF_00593614; iTF_00484207; iTF_00608943; iTF_00491984; iTF_00503760; iTF_00529328; iTF_00536528; iTF_00578288; iTF_00547826; iTF_00614675; iTF_00489140; iTF_00571668; iTF_00600820; iTF_00477109; iTF_00489845; iTF_00615349; iTF_00525654; iTF_00531446; iTF_00540854; iTF_00569462; iTF_00613270; iTF_00477783; iTF_00484887; iTF_00524183; iTF_00565143; iTF_00604599; iTF_00611159; iTF_00617399; iTF_00482744; iTF_00511769; iTF_00605337; iTF_00487771; iTF_00475708; iTF_00488476; iTF_00487069; iTF_00514653; iTF_00565853; iTF_00587902; iTF_00590014; iTF_00606078; iTF_00474271; iTF_00479935; iTF_00515359; iTF_00527071; iTF_00612575; iTF_00486336; iTF_00580450; iTF_01127074; iTF_01375491; iTF_00322180; iTF_00643846; iTF_00793286; iTF_00999337; iTF_00351626; iTF_00333843; iTF_01043382; iTF_00336483; iTF_00335625; iTF_00554160; iTF_00338903; iTF_00337274; iTF_01327651; iTF_01326926; iTF_01320953; iTF_00579047; iTF_00537993; iTF_00530031; iTF_00586440; iTF_00338089; iTF_00966922; iTF_00991523; iTF_01054990; iTF_01200675; iTF_01404580; iTF_00797501; iTF_01378143; iTF_01374735; iTF_00303572; iTF_00189698; iTF_00193314; iTF_00081900; iTF_00090924; iTF_01045230; iTF_01374734; iTF_01189138; iTF_00190453; iTF_00979125; iTF_01563449; iTF_01357690; iTF_01505146; iTF_01562522; iTF_00191131; iTF_00192571; iTF_00080956; iTF_00191836; iTF_00992318; iTF_00082688; iTF_01231347; iTF_00817182; iTF_01109108; iTF_01109107; iTF_01356628; iTF_00671976; iTF_00679240; iTF_01521640; iTF_01051686; iTF_01454625; iTF_01457098; iTF_01458104; iTF_01455424; iTF_01470261; iTF_01132682; iTF_01183574; iTF_00202277; iTF_01460901; iTF_01049415; iTF_01256167; iTF_00013774; iTF_00627984; iTF_00454294; iTF_00118456; iTF_00203256; iTF_01431609; iTF_00176156; iTF_00936317; iTF_00424414; iTF_00876798; iTF_00717471; iTF_01518655; iTF_00937024; iTF_01324662; iTF_00597915; iTF_01549339; iTF_01074204; iTF_01074203; iTF_00331306; iTF_00653345; iTF_01236418; iTF_00748739; iTF_00997475; iTF_00746468; iTF_00975364; iTF_00747973; iTF_00750214; iTF_00199623; iTF_00679239; iTF_00921863; iTF_01427239; iTF_00741609; iTF_01237417; iTF_00716394; iTF_00749450; iTF_01137738; iTF_01258987; iTF_00759852; iTF_01162028; iTF_01173933; iTF_01376397; iTF_00370734; iTF_00384334; iTF_00900302; iTF_01201358; iTF_00349935; iTF_00384335; iTF_01313519; iTF_01113968; iTF_00259537; iTF_01113969; iTF_01398193; iTF_00045138; iTF_01165298; iTF_01231346; iTF_01114771; iTF_01174835; iTF_01114772; iTF_01315252; iTF_00435285; iTF_00899285; iTF_01194133; iTF_01260757; iTF_00655096; iTF_00921208; iTF_01074202; iTF_01399226; iTF_01235483; iTF_00892477; iTF_01312797; iTF_01176702; iTF_01314430; iTF_01373822; iTF_00747231; iTF_00817183; iTF_01397087; iTF_00258624; iTF_01019200; iTF_01074205; iTF_01074206; iTF_00812479; iTF_01191743; iTF_01190982; iTF_00816308; iTF_01382676; iTF_01276727; iTF_01381851; iTF_01163709; iTF_00901247; iTF_01276032; iTF_00366979; iTF_01350437; iTF_01287866; iTF_00285167; iTF_01163708; iTF_00589312;
- 90% Identity
- iTF_00500065; iTF_00504449; iTF_00517474; iTF_00580450; iTF_00480643; iTF_00596419; iTF_00481316; iTF_00494148; iTF_00532868; iTF_00561509; iTF_00545734; iTF_00618918; iTF_00579751; iTF_00538728; iTF_00550025; iTF_00603113; iTF_00602346; iTF_00563659; iTF_00471372; iTF_00491276; iTF_00591468; iTF_00574573; iTF_00505166; iTF_00535822; iTF_00581294; iTF_00593614; iTF_00484207; iTF_00608943; iTF_00491984; iTF_00503760; iTF_00529328; iTF_00536528; iTF_00578288; iTF_00507378; iTF_00547826; iTF_00614675; iTF_01174835; iTF_00489140; iTF_00571668; iTF_00600820; iTF_00477109; iTF_00489845; iTF_00615349; iTF_00525654; iTF_00531446; iTF_00540854; iTF_00569462; iTF_00607574; iTF_00613270; iTF_00477783; iTF_00484887; iTF_00524183; iTF_00542903; iTF_00565143; iTF_00604599; iTF_00611159; iTF_00617399; iTF_00482744; iTF_00511769; iTF_00605337; iTF_00487771; iTF_00592155; iTF_00475708; iTF_00488476; iTF_00487069; iTF_00514653; iTF_00565853; iTF_00587902; iTF_00590014; iTF_00606078; iTF_00474271; iTF_00479935; iTF_00515359; iTF_00527071; iTF_00539423; iTF_00612575; iTF_00486336; iTF_00535073; iTF_00541537; iTF_00582721; iTF_00513219; iTF_00552067; iTF_00521924; iTF_00498629; iTF_00481991; iTF_00609640; iTF_00576105; iTF_00573805; iTF_00606829; iTF_00543502; iTF_00570158; iTF_00556976; iTF_00516753; iTF_00558417; iTF_00619601; iTF_00524882; iTF_00548563; iTF_00485621; iTF_00499349; iTF_00521109; iTF_00566549; iTF_00592853; iTF_00494870; iTF_00497910; iTF_00559990; iTF_00542199; iTF_00497144; iTF_00511032; iTF_00615960; iTF_00576825; iTF_00518204; iTF_00501565; iTF_00527805; iTF_00564413; iTF_00597118; iTF_00595711; iTF_00496352; iTF_00590721; iTF_01550753; iTF_00803362; iTF_00474979; iTF_00532131; iTF_00567299; iTF_01322403; iTF_00526340; iTF_01552932; iTF_00520389; iTF_00544229; iTF_00495622; iTF_00600071; iTF_01558791; iTF_00534345; iTF_00572361; iTF_01320233; iTF_01548617; iTF_00502282; iTF_00550698; iTF_00582026; iTF_01557322; iTF_00509579; iTF_01556587; iTF_01321676; iTF_01355884; iTF_00546414; iTF_00599342; iTF_01554446; iTF_00516015; iTF_00553519; iTF_00804943; iTF_00483440; iTF_00490544; iTF_00505872; iTF_00568016; iTF_00804144; iTF_01325424; iTF_00551345; iTF_00547122; iTF_00914258; iTF_00915090; iTF_01570002; iTF_00508083; iTF_00555603; iTF_00915987; iTF_01570003; iTF_00559252; iTF_00479253; iTF_00544981; iTF_00573077; iTF_01550037; iTF_00554838; iTF_00562230; iTF_00831894; iTF_01552214; iTF_01558038; iTF_00472824; iTF_00918808; iTF_01551481; iTF_00530714; iTF_00587162; iTF_00472123; iTF_00916955; iTF_00359229; iTF_00500797; iTF_00613949; iTF_00616669; iTF_01555197; iTF_00493406; iTF_00508862; iTF_00519678; iTF_00540126; iTF_00562942; iTF_00577534; iTF_01559518; iTF_00512479; iTF_00549311; iTF_00595007; iTF_00917823; iTF_01553727; iTF_00476384; iTF_00556320; iTF_00560800; iTF_00584192; iTF_00603840; iTF_00802592; iTF_00805728; iTF_01323873; iTF_01318789; iTF_00579047; iTF_00537993; iTF_01326154; iTF_01555884; iTF_00530031; iTF_00597915; iTF_01549339; iTF_00901247; iTF_00589312; iTF_00251106; iTF_00062502; iTF_00890730; iTF_00061684; iTF_01363700; iTF_00889886; iTF_00060863; iTF_00503010; iTF_00611821; iTF_00523440; iTF_00618105; iTF_00570876; iTF_00336483; iTF_00335625; iTF_00554160; iTF_00338903; iTF_00337274; iTF_00748739; iTF_00746468; iTF_00747973; iTF_00750214; iTF_01022759; iTF_00749450; iTF_01426445; iTF_01180917; iTF_00366267; iTF_01414717; iTF_00747231; iTF_01327651; iTF_01326926; iTF_01320953; iTF_01404580; iTF_00586440; iTF_00523441; iTF_00503011; iTF_00904530; iTF_00624500; iTF_00979125; iTF_01324662; iTF_00618106; iTF_00611822; iTF_00570875; iTF_00352318; iTF_00351626; iTF_01195774; iTF_01195042;
- 80% Identity
- -