Basic Information

Gene Symbol
Bgb
Assembly
GCA_002237135.5
Location
CM026970.3:1448050-1448685[-]

Transcription Factor Domain

TF Family
CBF
Domain
CBF_beta domain
PFAM
PF02312
TF Group
Beta-Scaffold Factors
Description
Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.2e-84 3.3e-79 265.7 3.4 1 166 30 191 30 192 0.97

Sequence Information

Coding Sequence
ATGAATGAGGCTGCAGCTCTTGCTGGTATGATTCCTTACGATACCATTGGTTTGTATGAACAACCAAAACcacgatttatttttaaaatgccaCGTGTGGTACCAGATCAGAAATCCAAGTTTGAGAGTGATGAATTATTCCGCCGTTTAAGCCGCGAAAGTGAAATTCGTTACACTGGCTATCGCGAACGTGCACCTGAAGAACGGCAGATACGTTTTCAAAATGGTTGCCGTGAGGGACACACCGAGGTATCATTTGTTGCTTCTGGCACTAATTTGCAGTTGGTATTCAATGCAAACCAAAATCCTTATATACAAGACAAAGAGTGCGATTTCGATAAAGAGCATGGTAAAGTACATATTAagtcatattttattatgaacgGTGTATGTGTGCGTTTTCGTGGTTGGTTGGATTTGGAGCGCTTAGATGGCGTTGGTTGTTTAGAATATGATGAACGGCGAGCCATGCATGAAGATGCTATTTTACGTGATCAAATTGATCGTTACAATCAACGTTTACGTGAGTTTGAGGATTCGAAACGTGCTTATCGCGATAATCGCACAGATGAAATGGAAGCAGTACGTCGTGGTGTGGCATCTGGAGGCATTGGACCTGGCGTATGGCGACGTTAG
Protein Sequence
MNEAAALAGMIPYDTIGLYEQPKPRFIFKMPRVVPDQKSKFESDELFRRLSRESEIRYTGYRERAPEERQIRFQNGCREGHTEVSFVASGTNLQLVFNANQNPYIQDKECDFDKEHGKVHIKSYFIMNGVCVRFRGWLDLERLDGVGCLEYDERRAMHEDAILRDQIDRYNQRLREFEDSKRAYRDNRTDEMEAVRRGVASGGIGPGVWRR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01319514;
90% Identity
iTF_01319514;
80% Identity
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