Alud023235.2
Basic Information
- Insect
- Anastrepha ludens
- Gene Symbol
- Bgb
- Assembly
- GCA_028408465.1
- Location
- JAPVRI010096651.1:2840-5132[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-82 8.8e-78 261.2 2.2 1 163 29 187 29 190 0.97
Sequence Information
- Coding Sequence
- atgaatgaaGCAGCATTGGCTAGTATGATTTATAACGACCCTATAGGCATCTATGAACAGCCCAGgccacgttttattttcaaaatgccGCGCGTGGTGCCCGATCAAAAGGCAAAATTTGAGAGTGACGAATTATTTCGTAGATTAAGCCGCGAAAGCGAGATACGCTATACTGGCTACCGTGAGCGTGCTTTAGAGGAACGCCAAATGCGATTCCACAATGGTTGCCGGGAGGGTCATACCGAGATCTCGTTCGTGGCATCGGGAACCAATCTGCAGCTGGTTTTTAATGCAACCCAGAATCCGTACTTACACGATAAAGAATGCGACTTTGATAAGGAACATGGTAAAGTGTACATAAAGTCATACTTCATAATGAATGGTGTATGTGTACGCTTTCGAGGTTGGCTAGATTTGGAGCGCTTAGATGGTTCGGGCTGCCTAGAGTTCGATGAACGGCGAGCCATGCATGAAGATCAAATATTACGTGAACAGATCGAGCGGTACAATTTGCGATTACGCGAGTTCGAAGACTCAAAACGTGCATATCGCGATAGCCGACCAGAGGTTGATATGGAAGCTGTTCGGCGTGGTGTGCCATCAGGTGGCATTGGTGTAGGTGCAAGTGCAAGTATGTGGCGGCGCTAA
- Protein Sequence
- MNEAALASMIYNDPIGIYEQPRPRFIFKMPRVVPDQKAKFESDELFRRLSRESEIRYTGYRERALEERQMRFHNGCREGHTEISFVASGTNLQLVFNATQNPYLHDKECDFDKEHGKVYIKSYFIMNGVCVRFRGWLDLERLDGSGCLEFDERRAMHEDQILREQIERYNLRLREFEDSKRAYRDSRPEVDMEAVRRGVPSGGIGVGASASMWRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01319514;
- 90% Identity
- iTF_00189698; iTF_00193314; iTF_00090924; iTF_01045230; iTF_01189138; iTF_00303572; iTF_00190453; iTF_01563449; iTF_01357690; iTF_01505146; iTF_01562522; iTF_00191131; iTF_00192571; iTF_00080956; iTF_00191836; iTF_00992318; iTF_00082688;
- 80% Identity
- -