Basic Information

Gene Symbol
Bgb
Assembly
GCA_027564075.1
Location
JANSTU010019763.1:2949-10745[-]

Transcription Factor Domain

TF Family
CBF
Domain
CBF_beta domain
PFAM
PF02312
TF Group
Beta-Scaffold Factors
Description
Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.2e-83 4.3e-79 264.1 3.4 1 165 31 191 31 193 0.97

Sequence Information

Coding Sequence
ATGATGAACGAGGCCGCCGCGCTCGCCGGAATGATTCCGTACGACACGATGGGCCTGTACGAGCAGCCAAAGCATCGGTTCATCTTTAAGATGCCACGCGTCGTGCCCGATCAGAAGACCAAGTTCGAGAGTGATGAGCTTTTTAGGCGATTGGGACGTGAGAGTGAGGTCCGCTACACAAACTTTCGTGATCGTCCGTCCGAGGAACGTCAGATTCGCTTTCAGAACGGCTGTCGTGAGGGTCACACCGAGGTGGCATTCGTAGCGTCCGGCACCAATCTACAGCTCATCTTTAATGCTAATCAGGGACCCTATACACAGGAGCGTGACTGTGACTTTGACAAGGAGCACGGCAAAGTTCATATTAAGTCGCACTTCATCATGAACGGCGTTTGCGTGAAATTCCGTGGTTGGGTGGATCTCGAGCGATTGGACGGTGTTGGTTGCCTAGAGTATGATGAACGTCGTGCCGCCCAAGAGGATGCCATACTGCGAGATCAGATCGATCGATATAATCAGCGTTTACGTGATTTCGAGGATAAACAGCGTGCCTATCGTGGCGATCGTCAGGAGGACATAGAAGCCGTTCGACGCGGAGGTATTGGTGTGGGCGTCGGTGGTGGTATGTGGCGTCGATAA
Protein Sequence
MMNEAAALAGMIPYDTMGLYEQPKHRFIFKMPRVVPDQKTKFESDELFRRLGRESEVRYTNFRDRPSEERQIRFQNGCREGHTEVAFVASGTNLQLIFNANQGPYTQERDCDFDKEHGKVHIKSHFIMNGVCVKFRGWVDLERLDGVGCLEYDERRAAQEDAILRDQIDRYNQRLRDFEDKQRAYRGDRQEDIEAVRRGGIGVGVGGGMWRR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01319514;
90% Identity
-
80% Identity
-