Stum003989.1
Basic Information
- Insect
- Scaptomyza tumidula
- Gene Symbol
- Bgb
- Assembly
- GCA_035044465.1
- Location
- JAWNNW010000442.1:8414037-8414681[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-81 1.2e-77 259.3 4.6 1 166 31 192 31 193 0.97
Sequence Information
- Coding Sequence
- ATGATGAACGAGGCTGCAGCACTCGCAAACATGATACCCTACGACACAATTGGACTCTACGAACAACCAAAGCCCCGTTTCATTTTCAAAATGCCACGAGTAGTACCCGAACAGAAGTCCAAGTTTGAAAGCGATGAGCTCTTTCGTCGCTTAAGTCGAGAAAGTGAAATTCGCTATACGGGCTATCGAGAGCGCAGCATTGAGGAGCGTCAGGTACGCTTCATGAACGGCTGTCGCGAGGGACACACAGAGGCGAGTTTCGTGGCATCGGGCACAAATCTGCAGCTAGTGTTCAATGCCAATCAGAATCCGTACCTACACGACAAGGAGTGCGACTTTGACAAGGAGCACGGCAAGGTGCATATTAAGTCATACTTCATTATGAATGGCGTCTGTGTGCGTTTCCGTGGATGGTTGGATCTGGAGCGCTTGGATGGCGTTGGCTGTTTGGAATACGACGAGCGCCGAGCCATGCATGAGGAAGCTATACTGCGCGACCAAATCGATCGCTACAATCAGCGTCTACGTGAGTTCGAGGACACCAAGCGCGCCTATCGCGATAACCGTCAGGACGAGATGGAAGCAGTGCGACGGGGTGTCGCCTCCGGCGGCATTGGTGTAGGCGCCAGTATGTGGCGCCGTTAG
- Protein Sequence
- MMNEAAALANMIPYDTIGLYEQPKPRFIFKMPRVVPEQKSKFESDELFRRLSRESEIRYTGYRERSIEERQVRFMNGCREGHTEASFVASGTNLQLVFNANQNPYLHDKECDFDKEHGKVHIKSYFIMNGVCVRFRGWLDLERLDGVGCLEYDERRAMHEEAILRDQIDRYNQRLREFEDTKRAYRDNRQDEMEAVRRGVASGGIGVGASMWRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01319514;
- 90% Identity
- iTF_01319514;
- 80% Identity
- iTF_01326926; iTF_01320953;