Nfer007681.1
Basic Information
- Insect
- Nowickia ferox
- Gene Symbol
- Bgb
- Assembly
- GCA_936446695.1
- Location
- CAKZFO010000055.1:1798307-1798954[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-80 2.8e-76 255.8 2.2 1 164 32 190 32 193 0.96
Sequence Information
- Coding Sequence
- ATGAACGAAGCAGCCTTAGCTGGAATAATACCCTACGATACTATACCTACGATAGGACTTTACGAGCAACCAAAACCAcgattcatatttaaaatgCCTCGCGTGGTTCCCGAccaaaaatctaaatttgaAAGTGAACTCTTTCGCCGTTTGAGTCGGGAGAGTGAGATACGGTACACTGGATATCGTGAGAGAGCTCTAGAAGAACGGCAAATACGTTTTCAAAATGGGTGCAGAGAAGGTCACACGGAGATTTCATTTGTTGCTTCGGGCACAAATCTACAACTTGTGTTTAATGCCACACAGAACCCTTATATACATGACAAAGAGTGCGAATTTGAAAAGGAACCGGGCAAAGTGCAcattaaatcatattttatcATGAATGGTGTATGTGTTAGATTTCGTGGTTGGCTAGACCTTGAACGGCTGGATGGAGTGGGCTGTTTAGAATATGACGAACGCAGGGCTATGCATGAAGATGCTATACTTCGAGATCAAATCGACCGTTATAATCAAAGATTGAGAGAATTTGAGGACTCCAAAAGAGCTTATCGGGAAAATCGACCTGAAGACATGGACGCAGTGCGACGTGGTGTTGCTTCTGGTGGAATAGGAGTTGGTGCTACAAGCATGTGGCGGCGTTAA
- Protein Sequence
- MNEAALAGIIPYDTIPTIGLYEQPKPRFIFKMPRVVPDQKSKFESELFRRLSRESEIRYTGYRERALEERQIRFQNGCREGHTEISFVASGTNLQLVFNATQNPYIHDKECEFEKEPGKVHIKSYFIMNGVCVRFRGWLDLERLDGVGCLEYDERRAMHEDAILRDQIDRYNQRLREFEDSKRAYRENRPEDMDAVRRGVASGGIGVGATSMWRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01319514;
- 90% Identity
- iTF_01074203; iTF_00331306; iTF_01236418; iTF_00997475; iTF_00975364; iTF_00199623; iTF_00921863; iTF_01427239; iTF_00741609; iTF_01237417; iTF_00716394; iTF_01137738; iTF_01258987; iTF_00759852; iTF_01162028; iTF_01173933; iTF_01376397; iTF_00370734; iTF_00900302; iTF_01201358; iTF_00349935; iTF_01313519; iTF_00259537; iTF_01398193; iTF_00045138; iTF_01165298; iTF_01109107; iTF_01315252; iTF_00435285; iTF_00899285; iTF_01194133; iTF_01260757; iTF_00655096; iTF_00921208; iTF_01074202; iTF_01399226; iTF_01235483; iTF_00892477; iTF_01312797; iTF_01176702; iTF_01314430; iTF_01373822; iTF_01397087; iTF_00258624; iTF_01074205; iTF_01074206;
- 80% Identity
- iTF_01074203;