Ooch012821.1
Basic Information
- Insect
- Ormia ochracea
- Gene Symbol
- Bgb
- Assembly
- GCA_963402855.1
- Location
- OY727108.1:51843789-51844426[+]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-05 0.12 12.1 0.1 1 13 29 41 29 42 0.96 2 2 1.2e-59 1.1e-55 187.9 3.4 28 163 39 170 39 174 0.96
Sequence Information
- Coding Sequence
- ATGAATGAAGCGGCCTTAGCTGGAATGTTACCGTATGATTCAATTGGGCTTTACGAACAGCCTAAGCCTcgattcatatttaaaatgcctCGTGTTGTGCCTGATCAAAAGTCAAAATTTGAAGGATATCGAGAACGAGCGCAGGAAGAACGCAAAGTACGTTTTCACAATGGTTGCCGAGAAGGTCATAGTGAAATATCATTTGTGGCTTCCGGAACTAATTTGcaattggtttttaatgctacacAGAATCCCTACATACACGACAAGGAGTGTGAATTTGATAAAGAGCTCGGAAAAGTTCACATCAAGTCATACTTTATCATGAATAGAGTTTGTGTCAGATTCCGCGGTTGGGTGAATCTGGAAAGACTTGATGGCGTAGGTTGTTTGGAATATGACGAACGCCGAGCTATGCATGAAGATGCTATATTAAGAGATCAAATTGATCGATACAACCAAAGATTGAGAGACTTTGAAGACTCTAAAAGAGCTTACAGAGAAAATCGACCTGACGACATGGATGCAGTGCGACTTGGTGTTGCTTCAAGTGGAATTGGAGTTGGCGCCGCGAGTATGTGGAGacgttaa
- Protein Sequence
- MNEAALAGMLPYDSIGLYEQPKPRFIFKMPRVVPDQKSKFEGYRERAQEERKVRFHNGCREGHSEISFVASGTNLQLVFNATQNPYIHDKECEFDKELGKVHIKSYFIMNRVCVRFRGWVNLERLDGVGCLEYDERRAMHEDAILRDQIDRYNQRLRDFEDSKRAYRENRPDDMDAVRLGVASSGIGVGAASMWRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01319514;
- 90% Identity
- -
- 80% Identity
- -