Dsim009836.1
Basic Information
- Insect
- Drosophila simulans
- Gene Symbol
- Bgb
- Assembly
- GCA_016746395.1
- Location
- NC:1607330-1608591[+]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.3e-83 4.3e-79 263.6 4.3 1 166 30 191 30 192 0.97
Sequence Information
- Coding Sequence
- ATGATGAACGAGGCGGCTCTTGCCAACATGATTCCCTACGACACCATCGGATTGTACGAACAGCCAAAGCCGCGCTTCATCTTCAAGATGCCTCGTGTGGTCCCGGACCAGAAGTCTAAGTTCGAGAGCGACGAACTTTTCCGGAGGCTCAGTCGGGAGAGCGAGGTTCGGTACACGGGCTACCGGGAGCGAAGCATCGAGGAGCGGCAGGTGCGCTTCATGAACGGATGTCGCGAAGGACACACGGAGGCCAGCTTCGTGGCCTCGGGCACCAATCTGCAGCTGGTGTTCAACGCCAACCAGAACCCGTACCTGCACGACAAGGAGTGCGACTTTGACAAGGAGCACGGCAAGGTGCACATCAAGTCCTACTTTATAATGAACGGGGTTTGTGTGCGGTTCCGTGGATGGATAGACCTGGAACGACTGGACGGAGTGGGCTGTCTGGAGTATGACGAGCGGCGCGCCATGCACGAGGACGCCATTCTGCGGGATCAGATCGATCGCTACAACCAGCGACTGCGTGAGTTCGAGGACACTAAGCGTGCCTACCGTGACAATCGACAGGACGAGATGGAGGCGGTGCGAAGGGGCGTGGCCTCCGGAGGCATTGGCGTCGGCGCCAGCATGTGGCGTCGTTAG
- Protein Sequence
- MMNEAALANMIPYDTIGLYEQPKPRFIFKMPRVVPDQKSKFESDELFRRLSRESEVRYTGYRERSIEERQVRFMNGCREGHTEASFVASGTNLQLVFNANQNPYLHDKECDFDKEHGKVHIKSYFIMNGVCVRFRGWIDLERLDGVGCLEYDERRAMHEDAILRDQIDRYNQRLREFEDTKRAYRDNRQDEMEAVRRGVASGGIGVGASMWRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01319514;
- 90% Identity
- iTF_01319514;
- 80% Identity
- iTF_00504449; iTF_00618918; iTF_00591468; iTF_00507378; iTF_00607574; iTF_00542903; iTF_00592155; iTF_00539423;