Ccau004995.1
Basic Information
- Insect
- Chymomyza caudatula
- Gene Symbol
- Bgb_1
- Assembly
- GCA_035041775.1
- Location
- JAWNKW010000073.1:2410858-2411502[+]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.5e-84 9.1e-80 266.2 4.1 1 166 31 192 31 193 0.97
Sequence Information
- Coding Sequence
- ATGATGAATGAAGCTGCTGCCTTGGCAAACATGATACCATACGATACCATAGGCCTATATGAGCAACCAAAACCCCGTTTTATCTTCAAAATGCCGCGCGTTGTTCCCGATCAGAAGTCCAAGTTCGAAAGTGATGAGTTGTTCCGTCGTCTGAGTCGAGAAAGTGAAATACGTTACACAGGCTATAGGGAGCGCAGCGTTGAGGAGCGCCAAGTTCGCTTTATGAACGGCTGCCGCGAGGGTCACACAGAGATTTCATTCGTGGCCTCTGGCACAAACTTGCAGCTCGTCTTCAATGCAAACCAGAATCCCTACCTTCACGACAAGGAATGTGACTTTGACAAAGAGCATGGCAAGGTGCATATTAAATCATACTTTATTATGAATGGCGTTTGTGTGCGTTTTCGTGGCTGGCTAGATTTGGAGCGTTTGGACGGCGTAGGTTGCCTTGAATACGATGAACGACGAGCCATGCATGAAGATGCTATTTTACGTGACCAAATCGATCGCTACAACCAGCGTTTGCGTGAGTTTGAGGACACCAAACGAGCCTATCGCGACAATCGGCAAGATGAGATGGAGGCAGTGCGTCGTGGTGTGGCGTCAGGCGGCATTGGTGTGGGAGCCAGTATGTGGCGACGTTAG
- Protein Sequence
- MMNEAAALANMIPYDTIGLYEQPKPRFIFKMPRVVPDQKSKFESDELFRRLSRESEIRYTGYRERSVEERQVRFMNGCREGHTEISFVASGTNLQLVFNANQNPYLHDKECDFDKEHGKVHIKSYFIMNGVCVRFRGWLDLERLDGVGCLEYDERRAMHEDAILRDQIDRYNQRLREFEDTKRAYRDNRQDEMEAVRRGVASGGIGVGASMWRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01319514;
- 90% Identity
- iTF_01319514;
- 80% Identity
- iTF_00335625; iTF_00338903; iTF_00337274;