Basic Information

Gene Symbol
KDM5A
Assembly
GCA_947538915.1
Location
OX384531.1:33063148-33073893[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.9e-24 8.6e-21 74.9 0.0 2 89 108 191 107 191 0.94
2 2 3.3 1.5e+04 -2.7 0.1 49 81 816 846 811 850 0.64

Sequence Information

Coding Sequence
ATGGTCTCTAAGGTGGATGTAAATATCGGGTCCGAGGCTCGGTTTGTTGGTACTTATCACGGTAAAGATATGAGTGAAAAAGGTGACACGGATTTTGAGTTCGCAATACCACCGGAGGCACCAGTATTCGAGCCAACAGCCGAGGAATTCCTCGACCCCCTTGGCTACATCTCGAAGATTCGTCCGATTGCCGAAAAGTCAGGAATTTGCAAAATAAAACCACCACCAAACTGGCAGCCACCATTCGCAGTCGACGTTGACAAATTCAAATTTGTACCAAGAATCCAAAGGCTAAACGAACTCGAAGCTAAGACCAGAATAAAGCTTAATTTTTTAGACCAAATAGCTAAATTCTGGGAACTCCAAGGATCTTCGTTAAAAATTCCACTTGTCGAAAGAAAAGCATTGGATTTGTATTCTCTGCATAGAATTGTCACCGAGGAAGGTGGGATAGAAATTGTAACAAAAGAAAGAAGATGGGCAAAAATAGCCAACAGGATAGGATATCCGTCTGGCCGAAGCGTCGGAAGTATTTTAAAGAATCATTATGAAAGAATTTTATACCCCTTTGACGTTTTCAAACAAGGAAAAACTCTCACAGATATTAAAATAGAGCCAGATGCAGACGTGAATGAGAAAAAAGACCGGGACTACAAACCTCACGGCATAATATCACGCCAGCAGATAAAACCACCGAATGAAAAATTCTCAAGGCGTTCAAAGCGGTTTGCCGGTACAGACGAAAAGCCAGATTTACTAACAGACAATACATCTCCGTTAAAGCAAGAGGATTGTAAAGATGAATGCGACTCAGACAACGAAAAGGACAAGGACAACAGCAAGGAGCTTAAAAAACTACAGTTTTATGGACCCGGTCCTAAAATGGCCGGTTTTAATACCAAAGATGTTAAAAAACCGAGCAAAACCAGAGGCGTTAAATTGCACTATGACTTTGACCCATTGGCCAAATACATTTGTCACAATTGCGGAAGAGGAGACACAGAAGAAAGCATGCTGTTATGCGACGGTTGCGACGACAGCTATCACACCTTCTGCCTCATGCCACCTCTCACGGAAATACCAAAGGGGGATTGGAGGTGCCCAAAATGCGTTGCTGAAGAGGTATCGAAGCCCATGGAAGCATTTGGCTTCGAACAAGCCCAAAGAGAATACACGCTACAACAGTTTGGCGAAATGGCTGACCAGTTCAAAAGCGATTACTTCAACATGCCAGTGCATATGGTGCCGACTCCCCTAGTGGAGAAAGAGTTCTGGCGTATCGTCTCTTCGATAGACGAAGATGTGACCGTTGAGTACGGCGCAGATTTACACACTATGGATCACGGCTCTGGTTTTCCGACAAAAACAAGCGTCAATTTGTTCACCTGTGATCAAGAGTATGCCGAGTCATCGTGGAACTTGAACAACCTACCGGTACTTCAAGGCAGCGTATTGGGACACATTAACGCAGACATCAGCGGGATGAAGGTTCCCTGGATGTACGTCGGCATGTGCTTTGCCACTTTCTGCTGGCATAACGAAGACCACTGGAGTTATTCCATCAATTACTTGCACTGGGGAGAGCCCAAGACTTGGTACGGGGTCCCTGGATCCCAGGCTGAGAGATTCGAACATTCCATGAAATCTGCTGCTCCAGAATTATTCCACAGCCAACCCGACCTCTTGCATCAACTCGTCACAATAATGAACCCAAACATATTGATGAACGAAGGAGTACCGGTATTCAGAACTGATCAACACGCCGGTGAATTCGTTGTTACTTTTCCCAGGGCTTATCACGCCGGTTTTAATCAAGGATACAACTTCGCAGAGGCTGTAAATTTCGCACCAGCTGATTGGCTTAAAATGGGCCGCGAATGTATTTCTCACTACTCAAACTTGAGACGTTTCTGTGTCTTCTCTCACGACGAACTCGTATGCAAAATGTCGCTGGATCCAGACTCTTTGGACATCGGTATAGCCACCGCAACTTATCACGACATGCTCCAAATGGTTGACGATGAGAAAAAACTCCGAAAAAATCTACTGGAATGGGGCGTAACGGAGGCGGAAAGAGAAGCCTTTGAGCTTTTGCCGGACGACGAAAGGCAGTGCGAGGCATGTAAAACGACCTGTTTCTTAAGTGCTGTGACGTGCGCTTGCCACAGTTCGCAGTTGGTTTGCCTGAGGCATTTTACAGACCTGTGCGATTGCCCGCCGGACAAACATACCCTAAGATATCGTTACACGCTCGATGAGTTACCGATAATGTTGCAGAAGCTTAAACTTAAAGCTGAGTCTTTTGACTCATGGGTATCTAAGGTGAAGGAGGCGATGGACCCAAAAGGAGACAAAATCGAGCTTACAGAACTAAAAGAATTGCTTAGCGAAGCAGAGGGCAAGAAGTTTCCCGAGAGCGAGCTCCTAACTGCTCTCACCACCGCTGTACAAGACGCTGAAAAATGCGCTAGCGTTGCTCAGCAGCTTTTAAATAACAAGCAGCGGACAAGGACCAGGCAGTCCGTGGATACTAAGTACAAACTTACAGTCGAAGAACTAACTCTGTTTTACAAAGAAATAACAAATCTTTGTTGCGAATTGAAGGAGTCTGACGGCGTTAAGTACATATTAGATCAGGTTGTACAGTTTCAAAAAGACGCGGAGGACTTAGAATCTAAAGAAGAAGTTTCCGACATTGATAAACTCGAGAAGTGTATAGATTTTGGTGATTCTATATGCATAGAGCTGCCGCAGCTTGTTCGACTGAAACAGAGACTATTACAAACTCAGTGGCTAGAAGAGGTGAAATCTATTCAAGAAGAACCAAAATCAGCGAGTCACGAGGACTTGGCTAAGTTAATAGAAAAAGGGATGACCATACCACCGCATATAAGCATAGAAAACACGCTGTCAAAGCTGAAGAATTTGATGTTGAAAATTGAGAAGTGGGAAGACAAGGCGAAGAATTATCTTCAGAATAAAAATCGACAGACTATAGTTACGATAGAAGAATTTTTCAAGGAATCCGACGCCATAGACGCCTATTTACCAAGTCTAGACAATTTACAAGATATATTAACGAAGGCAAAAAATTGGACCAAAAACGTTGAGGACATACAAGCGAAGGAAAACTTTCCCTACTATGATACCTTGGACGATTTGGTACGCAGAGGAAGAAACATCCCTCTTCATTTGGACCCGCTGCCTATTCTCGAGTCGACATTGTCACAGGCAAAAGTATGGAAAGAAAGAACTGCGCGAACTTTTCTGAGGAAGAATTCTCACTACACATTAATGGAGGCTCTCTCTCCGAGGATTGGGGTTGGCGTTCAGGCGATGAAAACGAAGAGAAACAAAGGCGAGGAGACGGTCGGCGCTGTATTTGTCTGCGATACTAAGTTGGATGATACTAACGACTCCGCCAATGTTGTGGCTGCCTTCAAACTCGCAGAACAACGCGAAATGGAAGCTATGAGGAATCTTAGAGAGAGGAATTTGACCAAGACTGAGATAGACGACTCGAGATATTGCGTCTGCCGGAGACCACGCTTCGGACTTATGCTTCAGTGCGAGTTGTGCAAGGATTGGTTCCACTCAAACTGCGTGCCTTTACCAAAAACTACGTACAAAGGGAAGCTTCCCATGTCTCGGGAGACTAAATTCCTCTGTCCCTGTTGTCTGAGGTCCCGCAGACCTCGGCTAGAGACTATTTTAGCACTCTTAGTAAGTTTACAGAAAATTCCTGTCCGGTTACCCGAGGGCGAAGCTCTGCAGTGTCTCACAGAACGAGCTATGAACTGGCAGGATCGAGCCAGGCAGGCTTTGGCTACCGACGAATTATCCTCTGCGCTAGCCAAGCTCTCAGTCTTATCTCAGAAGCTCGTCGAGGCTGCGGCGAGGGAGAAAACCGAGAAAATCATCAGCAGCGAACTGAAAAAGGCCGCAAACAACCCAGAACTGCACCAGAGAGTTCAAGCCATCGCTCCACTCAGCGGTGTACATTCCGACGACAGCGTACCGAGCACTGCTGACGACGACGAGGACGTTGTAACGATCGAGGACGACGAGCCTACTTGTAGTACGTTTAATAGTAACGAACACGATTATTCGTACGTTTCTAAGTTTCAACCCAACAAACTCCACGCCCAGGACCCTGACGCCGCTGTAGTGCTGTCAGAGAGTGCTAGAGCCCGATTAGAAGAGTTAATGATGGAGGGAGACCTGCTGGAGGTAGCCTTGGACGAGACGCAACACATATGGAAGATACTTAGCCACACTAACATACCCAGTAGCGTTCAAAAATACGCCACGTTTGAGGAGGTCCAAGCGACTTTCAAGCACGATATGAAAGACGTTAAGAAACGCGGGAGGAAGCGCAAGTCCGAGGAGTTTGAATTGCTGAAAAAACTCGGCAGGCAAAAGGTCGACGATAAGAACATCGTAAAACGCAAGGGAATCAACAAGGAGAAGAAGATATTCGTCGCTGTTGGACCCATAAAAAGAGGGCCTAGAAAGATGAAACGCAAGGAGGGAGAAGAGGGACCGAAGAAGCGCGGTGGTAACAGGAAAAAAACTAAACAAGACACTTCGGACGAAGAGGACGACTGTGCTGCAGTCAACTGCCTTCGTCCCAGCGGACGAGAAGTCGACTGGGTCCAGTGTGACGGAGGATGCGACGGATGGTTCCACATGCATTGCGTCGGTTTGGACCGTGCCGAAATCGCGGAAGAGGACGATTATATATGCAGTAATTGCAAAGATGGAGAACAGAATATCACGTTGGCAGGGACAGATCCTGACGACGAATCATTAGGGCTGGATGCACTTCTTTCGCTTTCTCAATCTCAGGGATACAACAGCGGAGATACTGAGCCGGAGATACAAGAAACTTCTACGTTCGTCAGGACTTACTAA
Protein Sequence
MVSKVDVNIGSEARFVGTYHGKDMSEKGDTDFEFAIPPEAPVFEPTAEEFLDPLGYISKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTEEGGIEIVTKERRWAKIANRIGYPSGRSVGSILKNHYERILYPFDVFKQGKTLTDIKIEPDADVNEKKDRDYKPHGIISRQQIKPPNEKFSRRSKRFAGTDEKPDLLTDNTSPLKQEDCKDECDSDNEKDKDNSKELKKLQFYGPGPKMAGFNTKDVKKPSKTRGVKLHYDFDPLAKYICHNCGRGDTEESMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTPLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLQGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILMNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECISHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCACHSSQLVCLRHFTDLCDCPPDKHTLRYRYTLDELPIMLQKLKLKAESFDSWVSKVKEAMDPKGDKIELTELKELLSEAEGKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKYILDQVVQFQKDAEDLESKEEVSDIDKLEKCIDFGDSICIELPQLVRLKQRLLQTQWLEEVKSIQEEPKSASHEDLAKLIEKGMTIPPHISIENTLSKLKNLMLKIEKWEDKAKNYLQNKNRQTIVTIEEFFKESDAIDAYLPSLDNLQDILTKAKNWTKNVEDIQAKENFPYYDTLDDLVRRGRNIPLHLDPLPILESTLSQAKVWKERTARTFLRKNSHYTLMEALSPRIGVGVQAMKTKRNKGEETVGAVFVCDTKLDDTNDSANVVAAFKLAEQREMEAMRNLRERNLTKTEIDDSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTTYKGKLPMSRETKFLCPCCLRSRRPRLETILALLVSLQKIPVRLPEGEALQCLTERAMNWQDRARQALATDELSSALAKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSVPSTADDDEDVVTIEDDEPTCSTFNSNEHDYSYVSKFQPNKLHAQDPDAAVVLSESARARLEELMMEGDLLEVALDETQHIWKILSHTNIPSSVQKYATFEEVQATFKHDMKDVKKRGRKRKSEEFELLKKLGRQKVDDKNIVKRKGINKEKKIFVAVGPIKRGPRKMKRKEGEEGPKKRGGNRKKTKQDTSDEEDDCAAVNCLRPSGREVDWVQCDGGCDGWFHMHCVGLDRAEIAEEDDYICSNCKDGEQNITLAGTDPDDESLGLDALLSLSQSQGYNSGDTEPEIQETSTFVRTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00873598;
90% Identity
iTF_01199923;
80% Identity
iTF_01411260;