Basic Information

Insect: Phylloecus linearis
Gene Symbol: retn
Assembly: GCA_030142575.1
Location: JARQTE010000387.1:330979-336219[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1e-19 1.5e-16 60.5 0.0 17 89 13 83 6 83 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1e-19	1.5e-16	60.5	0.0	17	89	13	83	6	83	0.94

Sequence Information

Coding Sequence: ATGATAGACGTTGAACGAGTTTTGAGCTTAAGCGTCGGTACCCCGATCAATCGACTGCCAATCATGGCCAAGTCTGTACTGGACTTGTACGAACTTTACAACCTGGTAATAGCACGCGGTGGTCTGGTGGACGTGATCAACAAGAAGCTATGGCAGGAGATCATCAAGGGACTTCACTTACCTTCCAGCATTACTTCTGCAGCATTCACATTGAGGACTCAATACATGAAGTACCTGTACCCTTACGAGTGCGAAAAAAGGAGGCTCTCAACGCCGGCCGAACTTCAAGCAGCGATCGATGGAAATCGCCGTGAAGGACGTCGCAGTAGTTACGGTGCATACGCCGCCGGGGTGGGCGGAGGGGCCGACAGTCTAGTACAAAGAAGTCCACACACCCCAAGCTCTCTAGCTCTTCACGCACAGATGTCACCACTGTCGCTGGTAACAGCCGTAGCCGCCGGTGGCCAGCATCACGGAGCCCAATCACTGGTGAACGGAAGTGCTGCTCACACGCCGCTCCCGCACCACCCCCATCACCCGCAGCATCCCCAGGGTCCCCTAAGTCAGCCACCGAATTCCGGTCCCATTCCTGGCATGGCTCCAGCCGAATTTGAGGCCAGAATGGTAGAATACGTAAAGCTGTTGAATAAGGAACTGAGAAGCGCCGGAGGTGGCACGCCGCCACCGATGATACATCGACAGGGTAGCGCGTCACCGCCTTCGTCGACGCCGCCGCGAGATAGCGCCTTCAGCGCTTTGGAAATGTCGCGACTTACCCTCTGGAACATGTACAACAACAACACCCTGTATCCTGGGGTGGGTCATCAGCCGCCGCTGTCGCCGCAGACGTCCCATTCGCCGCTGCCGCCTAACAGCAGTCCCGAACCACAGAGAGAGGCTCTGGATTTGGGTTTGAGGTCATCGCCCATGTCATCATCACCGACCAGACAGAGTCCGCCATCTTCCGGTGGCAGCGTTCAGGTGAAGAGGGAACAAGAGATCATCGGTACACCTGGTCCACCACCAGCGAAGAGGTTACTCTCGGACGACGAGAGTCCTGCGGAAAAGTCAGTACCAGCCTTGGCAGGGACCCACATCAAGATCTCGAACAGAGGTGACGGACGCAATGGTGACAACTCCTTGGTCGTCAGTATGGAGCTGAACGGTGTGATGTACCAGGGTGTCCTGTTTGCTCAGACCGATAGCAGGAGCTCGACGACGACCACGACgaccagcagcagcaccagcacCAAAGCACCGCGGAGCGTCGTATCGTGA
Protein Sequence: MIDVERVLSLSVGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYAAGVGGGADSLVQRSPHTPSSLALHAQMSPLSLVTAVAAGGQHHGAQSLVNGSAAHTPLPHHPHHPQHPQGPLSQPPNSGPIPGMAPAEFEARMVEYVKLLNKELRSAGGGTPPPMIHRQGSASPPSSTPPRDSAFSALEMSRLTLWNMYNNNTLYPGVGHQPPLSPQTSHSPLPPNSSPEPQREALDLGLRSSPMSSSPTRQSPPSSGGSVQVKREQEIIGTPGPPPAKRLLSDDESPAEKSVPALAGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQTDSRSSTTTTTTSSSTSTKAPRSVVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00253343;
90% Identity: iTF_00770156; iTF_01199188; iTF_01130594; iTF_01473699; iTF_01394910; iTF_00251849; iTF_00254100; iTF_00295788; iTF_00254864; iTF_00294249; iTF_00292718; iTF_00291316; iTF_00252598; iTF_00293494; iTF_01472957; iTF_01474466; iTF_00298088; iTF_00296553; iTF_00295019; iTF_00297327; iTF_01475226; iTF_00253343;
80% Identity: iTF_00770156;