Cfum008943.1
Basic Information
- Insect
- Cephus fumipennis
- Gene Symbol
- retn
- Assembly
- GCA_030142355.1
- Location
- JARQSY010000586.1:383343-408208[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-26 1.1e-22 80.7 0.0 2 89 26 111 25 111 0.96
Sequence Information
- Coding Sequence
- ATGGTTGGACCCGTGGAAGAGGGTGGGGGTGCCGGGTTCCCAACAgcgTTGTACGAGATCAACGACGATCCGAAGAGGAAAGAATTTCTCGATGATCTCTTCAGTTATATGCAAAAACGTGGTACACCAATCAATCGACTGCCAATCATGGCCAAGTCTGTACTCGACTTGTACGAACTATATAACTTAGTAATCGCTCGAGGTGGTCTGGTCGACGTGATCAACAAGAAGCTATGGCAAGAGATCATCAAGGGGCTTCACTTACCTTCCAGCATCACTTCAGCAGCATTCACACTGAGGACTCAATACATGAAGTACCTGTACCCTTACGAGTGCGAAAAAAGGAGGCTGTCAACACCGGCTGAGCTTCAAGCAGCGATCGATGGAAATCGGCGTGAAGGTCGGCGCAGCAGTTACGGTGCATATGCAGGGGGTGGCGGAGGGGGTGATAGCCTGGTACAGAGAAGTCCCCACACCCCGAGCTCTCTAGCACTTCACGCACAGATGTCACCCTTGTCACTGGTAACAGCCGTAGCCGCCGGTGGACAGCATCATGGACCACAATTGGTGAACGGAAGTGCCGCGCACACACCGCTCCCACACCATCCCCATCATCCTCAGCATCCTCAAGGTCCATTAGGTCAGCCACCTAGTTCGGGTCCAATTCCTGGAATGGCTCCAGCTGAATTTGAAGCCAGAATGGTAGAATACGTAAAACTATTGAATAAGGAATTAAGAAGCGCCGGAGGCGGTACACCACCACCCATGATTCATCGACAGGGCAGCGCATCCCCACCTTCATCAACACCACCACGTGACAGTGCATTCAGTGCTTTGGAAATGTCGCGGCTTACCCTATGGAACATGTACAACAATAACACCCTCTATCCTGGAGTGGGTCATCAGCCACCACTCTCACCACAGACGTCGCATTCGCCTTTGCCGCCAAACAGCAGTCCCGAACCACAGAGAGAGGCTCTCGACTTGGGTCTGAGGTCCTCGCCCATGTCCTCTTCGCCGACCAGACAGAGTCCACCGTCATCCGGTGGCAGTGTCCAGGTAAAAAGGGAACAGGAGATCACTGGTACACCTGGTCCACCACCAGCAAAGAGGTTACTCTCCGACGACGATAGTCCTGCGGAAAAATCAGTACCAGCCTTGGCAGGCACGCACATTAAGATCTCAAACAGAGgtgACGGACGCAATGGTGACAATTCCTTGGTCGTCAGTATGGAACTAAACGGTGTAATGTACCAGGGTGTATTGTTCGCCCAAACAGAGAGCAGGAACGCGACGACGACCACGACGACCAGCAACAGCACCAAAGCACCGCGAAGCGTCGTATCGTGA
- Protein Sequence
- MVGPVEEGGGAGFPTALYEINDDPKRKEFLDDLFSYMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYAGGGGGGDSLVQRSPHTPSSLALHAQMSPLSLVTAVAAGGQHHGPQLVNGSAAHTPLPHHPHHPQHPQGPLGQPPSSGPIPGMAPAEFEARMVEYVKLLNKELRSAGGGTPPPMIHRQGSASPPSSTPPRDSAFSALEMSRLTLWNMYNNNTLYPGVGHQPPLSPQTSHSPLPPNSSPEPQREALDLGLRSSPMSSSPTRQSPPSSGGSVQVKREQEITGTPGPPPAKRLLSDDDSPAEKSVPALAGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQTESRNATTTTTTSNSTKAPRSVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00253343;
- 90% Identity
- iTF_01198450;
- 80% Identity
- iTF_00294249;