Cbra008829.1
Basic Information
- Insect
- Cephus brachycercus
- Gene Symbol
- retn
- Assembly
- GCA_030142315.1
- Location
- JARQSX010000563.1:326147-333106[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.9e-20 1.2e-16 60.9 0.0 15 89 31 103 21 103 0.93
Sequence Information
- Coding Sequence
- ATGATTGTCGCATTGATAGAATCAAAGTGGAAACTTTTAGTAACAACTGTAGTAACGGCCTACAACCTGGTACGTTCCAGGCGCAAAGCTTCGAAGAGTACACCAATCAATCGACTGCCAATCATGGCCAAGTCTGTACTCGACTTGTACGAACTATATAACTTAGTAATCGCTCGAGGTGGTCTGGTCGACGTGATCAACAAGAAGCTATGGCAAGAGATCATCAAGGGACTTCACTTACCTTCCAGCATCACTTCAGCAGCATTCACACTGAGGACTCAATACATGAAGTACCTGTACCCTTACGAGTGCGAAAAAAGGAGGCTGTCAACACCGGCTGAGCTTCAAGCAGCGATCGATGGAAATCGGCGTGAAGGTCGGCGCAGCAGTTACGGTGCATATGCAGGGGGTGGCGGAGGGGGTGATAGCCTGGTACAGAGAAGTCCCCACACCCCGAGCTCTCTAGCACTTCACGCACAGATGTCACCCTTGTCACTGGTAACAGCCGTAGCCGCCGGTGGACAGCATCATGGACCACAATTGGTGAACGGAAGTGCCGCGCACACACCGCTCCCACACCATCCCCATCATCCTCAGCATCCTCAAGGTCCATTAGGTCAGCCACCTAGTTCGGGTCCAATTCCTGGAATGGCTCCAGCTGAATTTGAAGCCAGAATGGTAGAATACGTAAAACTATTGAATAAGGAATTAAGAAGCGCCGGAGGCGGTACACCACCACCCATGATCCATCGACAGGGCAGCGCATCCCCACCTTCATCAACACCACCACGTGACAGTGCATTCAGTGCTTTGGAAATGTCGCGGCTTACCCTATGGAACATGTACAACAATAACACCCTCTATCCTGGAGTGGGTCATCAGCCACCACTCTCACCACAGACGTCGCATTCGCCTTTGCCGCCAAACAGCAGTCCTGAACCACAGAGAGAGGCTCTCGACTTGGGTCTGAGGTCCTCGCCCATGTCCTCTTCGCCGACCCGACAGAGTCCACCGTCATCCGGTGGCAGTGTCCAGGTAAAAAGGGAACAGGAGATCACTGGTACACCTGGTCCACCACCAGCAAAGAGGTTACTCTCCGACGACGATAGTCCTGCGGAAAAATCAGTACCAGCCTTGGCAGGCACGCACATTAAGATCTCAAACAGGGgtgACGGACGCAATGGTGACAATTCCTTGGTCGTCAGTATGGAACTAAACGGTGTAATGTACCAGGGTGTATTGTTCGCCCAAACAGAGAGCAGGAACGCGACGACGACCACGACGACCAGCAACAGCACCAAAGCACCGCGAAGCGTCGTATCGTGA
- Protein Sequence
- MIVALIESKWKLLVTTVVTAYNLVRSRRKASKSTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYAGGGGGGDSLVQRSPHTPSSLALHAQMSPLSLVTAVAAGGQHHGPQLVNGSAAHTPLPHHPHHPQHPQGPLGQPPSSGPIPGMAPAEFEARMVEYVKLLNKELRSAGGGTPPPMIHRQGSASPPSSTPPRDSAFSALEMSRLTLWNMYNNNTLYPGVGHQPPLSPQTSHSPLPPNSSPEPQREALDLGLRSSPMSSSPTRQSPPSSGGSVQVKREQEITGTPGPPPAKRLLSDDDSPAEKSVPALAGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQTESRNATTTTTTSNSTKAPRSVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00253343;
- 90% Identity
- iTF_01198450;
- 80% Identity
- iTF_00294249;