Spar000720.1
Basic Information
- Insect
- Syrista parreyssii
- Gene Symbol
- retn
- Assembly
- GCA_030142615.1
- Location
- JARQTG010000023.1:404331-410650[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-20 4.8e-17 62.1 0.0 8 89 10 106 4 106 0.84
Sequence Information
- Coding Sequence
- ATGTTTCTGCGTCGTGAAACATTGAGAAAGTTGAGAAATCATTGTAGCATTAATGGAATTAAAGTGGGAACTTGTAGTAACAACTGCAGTAACGGCCTGCAACCTGGTACGCCAATCAATCGACTGCCAATCATGGCCAAGTCTGTGCTCGACTTGTACGAACTATATAACCTAGTAATCGCTCGAGGTGGTCTGGTCGACGTGATCAACAAGAAGCTATGGCAAGAGATCATCAAGGGACTTCACTTACCTTCCAGCATCACTTCAGCAGCGTTCACACTGAGGACTCAATACATGAAGTACCTGTACCCTTACGAGTGCGAAAAAAGGAGGCTGTCAACACCGGCTGAGCTTCAAGCAGCGATCGATGGAAATCGGCGTGAAGGACGTCGCAGCAGTTACGGTGCATATGCAGGGGCTGGTGCAGGAGGTGACAGTTTAGTACAGCGAAGTCCGCACACGCCCAGCTCTCTCGCACTTCACGCGCAGATGTCGCCCTTGTCGCTGGTAACAGCCGTAGCCGCCGGTGGGCAGCATCATGGACCACAATCATTGGTGAACGGAAGTGCCGCACACACACCGCTCCCACACCATCCCCATCATCCCCAGCATCCTCAGGGTCCATTAGGTCAGCCACCTAATTCAGgTCCAATTCCTGGCATGGCTCCAGCTGAATTTGAAGCCAGGATGGTAGAATATGTAAAACTATTGAATAAGGAATTGAGAAGCGCCGGAGGCGGTACACCACCACCCATGATTCATAGACAGGGTAGCGCATCACCACCTTCATCAACACCACCACGTGACAGTGCATTCAGTGCTTTGGAAATGTCGCGGCTTACCCTCTGGAACATGTACAACAATAACACCCTCTATCCTGGGGTGGGTCATCAACCACCACTCTCACCACAGACGTCGCACTCGCCTCTGCCGCCAAACAGCAGTCCTGAACCACAGAGAGAGGCTCTCGACTTGGGTCTGAGGTCCTCGCCCATGTCCTCTTCGCCGACCAGACAGAGTCCACCGTCATCCGGTGGCAGTGTCCAGGTTAAAAGGGAACAGGAGATCTCTGGTACACCTGGTCCGCCACCAGCAAAGAGGTTACTCTCCGACGACGATAGTCCTGTGGAAAAACCAGTACCAGCCTTGGCAGGCACGCACATCAAGATCTCAAACAGAGgtgACGGACGCAATGGTGACAATTCCTTGGTCGTCAGTATGGAGCTAAACGGTGTAATGTACCAGGGTGTATTGTTCGCCCAGACAGAGAGCAGGAGCGCGACGACGACCACGACGACCAACAACAGCACCAAAGCACCACGAAGCATCGTATCGTGA
- Protein Sequence
- MFLRRETLRKLRNHCSINGIKVGTCSNNCSNGLQPGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYAGAGAGGDSLVQRSPHTPSSLALHAQMSPLSLVTAVAAGGQHHGPQSLVNGSAAHTPLPHHPHHPQHPQGPLGQPPNSGPIPGMAPAEFEARMVEYVKLLNKELRSAGGGTPPPMIHRQGSASPPSSTPPRDSAFSALEMSRLTLWNMYNNNTLYPGVGHQPPLSPQTSHSPLPPNSSPEPQREALDLGLRSSPMSSSPTRQSPPSSGGSVQVKREQEISGTPGPPPAKRLLSDDDSPVEKPVPALAGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQTESRSATTTTTTNNSTKAPRSIVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00253343;
- 90% Identity
- iTF_01198450;
- 80% Identity
- -