Cpar008999.1
Basic Information
- Insect
- Cephus parvus
- Gene Symbol
- retn
- Assembly
- GCA_030142435.1
- Location
- JARQTA010000609.1:404273-411135[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.4e-20 1.4e-16 61.0 0.0 16 89 27 98 14 98 0.92
Sequence Information
- Coding Sequence
- ATGGAAACTTTTAGTAACAACTGTAGTAACGGCCTACAGCCTGGTACGTTCCAAGCGCAAAGCTTCGAAGAGTTGAGGTTAGGTACACCAATCAATCGACTGCCAATCATGGCCAAGTCTGTACTCGACTTGTACGAACTATATAACTTAGTAATCGCTCGAGGTGGTCTGGTCGACGTGATCAACAAGAAGCTATGGCAAGAGATCATCAAGGGACTTCACTTACCTTCCAGCATCACTTCAGCAGCATTCACACTGAGGACTCAATACATGAAGTACCTGTACCCTTACGAGTGCGAAAAAAGGAGGCTGTCAACACCGGCTGAGCTTCAAGCAGCGATCGATGGAAATCGGCGTGAAGGTCGGCGCAGCAGTTACGGTGCATATGCAGGGGGTGGCGGAGGGGGTGATAGCCTGGTACAGAGAAGTCCCCACACCCCGAGCTCTCTAGCACTTCACGCACAGATGTCACCCTTGTCACTGGTAACAGCCGTAGCCGCCGGTGGACAGCATCATGGACCACAATTGGTGAACGGAAGTGCCGCGCACACACCGCTCCCACACCATCCCCATCATCCTCAGCATCCTCAAGGTCCATTAGGTCAGCCACCTAGTTCGGGTCCAATTCCTGGAATGGCTCCAGCTGAATTTGAAGCCAGAATGGTAGAATACGTAAAACTATTGAATAAGGAATTAAGAAGCGCCGGAGGCGGTACACCACCACCCATGATTCATCGACAGGGCAGCGCATCCCCACCTTCATCAACACCACCACGTGACAGTGCATTCAGTGCTTTGGAAATGTCGCGGCTTACCCTATGGAACATGTACAACAATAACACCCTCTATCCTGGAGTGGGTCATCAGCCACCACTCTCACCACAGACGTCGCATTCGCCTTTGCCGCCAAACAGCAGTCCCGAACCACAGAGAGAGGCTCTCGACTTGGGTCTGAGGTCCTCGCCCATGTCCTCTTCGCCGACCAGACAGAGTCCACCGTCATCCGGTGGCAGTGTCCAGGTAAAAAGGGAACAGGAGATCACTGGTACACCTGGTCCACCACCAGCAAAGAGGTTACTCTCCGACGACGATAGTCCTGCGGAAAAATCAGTACCAGCCTTGGCAGGCACGCACATTAAGATCTCAAACAGAGgtgACGGACGCAATGGTGACAATTCCTTGGTCGTCAGTATGGAACTAAACGGTGTAATGTACCAGGGTGTATTGTTCGCCCAAACAGAGAGCAGGAACgcgacgacgaccacgacgaccagCAACAGCACCAAAGCACCGCGAAGCGTCGTATCGTGA
- Protein Sequence
- METFSNNCSNGLQPGTFQAQSFEELRLGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYAGGGGGGDSLVQRSPHTPSSLALHAQMSPLSLVTAVAAGGQHHGPQLVNGSAAHTPLPHHPHHPQHPQGPLGQPPSSGPIPGMAPAEFEARMVEYVKLLNKELRSAGGGTPPPMIHRQGSASPPSSTPPRDSAFSALEMSRLTLWNMYNNNTLYPGVGHQPPLSPQTSHSPLPPNSSPEPQREALDLGLRSSPMSSSPTRQSPPSSGGSVQVKREQEITGTPGPPPAKRLLSDDDSPAEKSVPALAGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQTESRNATTTTTTSNSTKAPRSVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00253343;
- 90% Identity
- iTF_01198450;
- 80% Identity
- iTF_00293494; iTF_00295788; iTF_00292718; iTF_00291316;