Pchl023816.1
Basic Information
- Insect
- Petrophora chlorosata
- Gene Symbol
- nfxl1
- Assembly
- GCA_951640565.1
- Location
- OX621210.1:12087738-12090212[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 3.3e+04 -7.8 5.6 15 19 135 139 134 139 0.81 2 18 0.01 1.7e+02 3.2 0.3 4 10 170 176 169 177 0.97 3 18 3.1e-07 0.0051 17.6 15.9 3 19 187 203 186 203 0.95 4 18 6.9e-07 0.011 16.5 13.7 4 19 241 256 238 256 0.92 5 18 3e-09 4.8e-05 24.1 13.3 1 19 291 309 291 309 0.99 6 18 2.7e-05 0.44 11.4 21.8 3 19 346 362 338 362 0.86 7 18 2 3.3e+04 -5.3 2.2 5 10 385 390 385 390 0.88 8 18 8.4e-06 0.14 13.1 18.7 1 18 396 413 396 414 0.97 9 18 8e-09 0.00013 22.7 16.9 1 19 423 441 423 441 0.99 10 18 0.0002 3.3 8.6 6.4 9 19 489 499 487 499 0.89 11 18 0.00098 16 6.5 9.0 1 12 509 519 509 519 0.96 12 18 0.4 6.6e+03 -1.9 3.4 14 18 548 552 548 553 0.85 13 18 0.21 3.3e+03 -1.0 0.4 8 12 569 573 568 580 0.79 14 18 9.1e-06 0.15 13.0 5.3 1 11 589 599 589 600 0.97 15 18 0.51 8.3e+03 -2.2 1.1 15 18 614 617 613 618 0.82 16 18 0.0013 21 6.1 16.1 4 18 631 646 629 647 0.82 17 18 2 3.3e+04 -6.5 3.4 9 13 653 657 653 657 0.71 18 18 3.5e-06 0.057 14.3 14.6 1 18 688 706 688 707 0.90
Sequence Information
- Coding Sequence
- ATGGCGCGACGTTACCGCGACGCTGCTGCGAAATTGCAGCAAAACGTCCAGAAGCATTTGAAAGAAATGAAGGATCATCTCTCCTCTTCCGAAGATGAGGATCCGTATGAGCCCAGCGTCTTGGAAGGAGTGTTCCAGAGTTACTGGCGAGGCGGCGGAGACACTCGTATGCTGAATAGGACCAAAAACCTTCTCGAGGAAGCTTTAAGCGGCCGCTCCGTGACTTGCCTCATTTGTATCGCCTCCATCAAACGAAACCACGCCATTTGGACCTGTGACCACTGCTACTCTTACTTCCACCTCTCATGCATACAAAAGTGGGCTAACGACAGCATAAGTCTCCGTAATGAAGAAAATCAAGGTCCAGTTTCTGTGTTTATACCTAAAAAGGTGGAATGGTGCTGTCCAAAGTGCCGGCAGGCGTATAGTAAGGAACAGATCCCGCGTAAGTACAGATGCTTCTGTGGCAAAGTTGATGATCCTCCCCAACACCCATGGCAGATCCCTCACACCTGCGGAGAGGTATGTGGAAAGAGACTGTCTACTGGAGACAACTGCAAGCATAAGTGCTTACTCCTCTGTCACCCTGGACCGTGCCCGCCATGTCCCCAAACCGTGAATGGAATATGCTACTGCCAAAAGGAGCACAAAAAAGTCAGATGCAGTTCTGCAAAATGGTCCTGTGGCCAGCAGTGTAAGAAAACTTTGCTCTGTCGGGCTCATAAATGTGAAACTGAATGCCATGATGGTGAATGCCCTCCTTGTAGCTACACAAGTGTACAGTCATGTCAATGTGGGCGTGAGAAGTCGAAACGACCCTGCAATGATCCCTTCTGGCAGTGCACTACACCATGCAATAAGCCATTCTCCTGTGGCTATCATAAATGTGAGAAGATATGCCACTCTGGCACTTGTGGCTCTTGTCCCAATTCTGGCATGCGGTCCTGCCCCTGTGGAGCTGACCAGCGCTTGGTCCAATGTCCAGATGTCATGGAAACCTGTCTTGGAACCTGTGGCAAAAGACATGATGATTGTGAGCACCACTGCCCGGAGAAATGCCACAAAGGTCCATGTCCACCTTGCCAGGTGCTAATACAAAAGAAATGTCAATGCTCAACTCATACCAGATCTTTACCATGCAGCAAGGAATTCAAATGTGAAACAAAATGTCGGGGCACTAGGCCATGTGGGAAACATGGCTGTGCAAAGAAATGCTGCAATGGTAACTGTCCTCCATGTGAAAAATCTTGCGACAAACCTCTTCAATGTGGACGTCATAAATGCACCAATATCTGCCATCACGGTCCATGCTATCCTTGTCCACTGGAGTCTAAAGTTACTTGTAAATGTAAAGAGACCTACCTGACTGTTCCATGTGGAAGAGAAAGATTTGTAAAGCCACCAAAATGCAGCATTCCATGCAAAGTCAAATATAAGTGTGGTCATCTAGTAGAAAACAAACATTCTTGTCATTTTGGAGACTGCCCTCCATGCAAGGCCATTTGCAATAAAACATATCCTAAATGTGGTCATGAATGTGAATCTACCTGCCATGAGTATGTTGCTATAGTCTTCAAACAAGTAGAGAAACCGGCTACTCCTTGGGAAGTTCAGCCTCCGAAAACTAAAATCATGACTTTGGAATGCCCTCCATGTGATGTTCCTGTCCCTATCACCTGCTTTGGAGAACATGAGACAGAAGATCAACCCTGTCATTCGGCTGCACGTCGGCCGTGCGGACGAGAATGTGGTAGACCATTAGCATGTGGTAACCACAAGTGTACTCTACTCtgtcatttatttcattcagaTCCTGAATATCCACACATACCTTATGCTTGCAAGCCGTGTAACCAAGGATGTCAGAAACGGCGGCCAGATAAATGCGCACACAAATGTGCTAAAGCAGCTTGCCATCCTGGCCATTGCCCACCTTGTGAAATCTATGAACGAATACCTTGTCACTGTGGTACTACAGAACTATATCTGCGCTGTCGTGAACTTGACACAGCTTCTGAAGAAATATTATCATGCAAGCAGCAATGTCCAAAGAACTTGGAGTGTGGTCACCGCTGCCGAAATACCTGCCATTCTGGACCATGTGGTACACAAACATGTACTAAAAAGACTAAAATACACTGCCAATGCggtaatttgaaaaaagaagcgCCATGCAATGCCGTCAGAAACAGTGAAGCAAAAGTTATGTGTGATGAGTCTTGTGAAGCAAAAAAGCTAGCTGCAAAGATTGAGAATGAAAAAGAACAACAGAGACTGAAGCAGTTAGAAGAAGAGAGAAATAAAAAGGAACTAGCAGAATATGAGTGGAAGCTAAGTGGGAAAAAGAAGAagtataaagaaaagaaagccATAATTAACAAAGATGATAGGAACTGGGTGCAAAAATATTGGATGCCTATATTCTCAGTTTTGGTTGTggttttagcatttttatattacatattttacttGTAG
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLKEMKDHLSSSEDEDPYEPSVLEGVFQSYWRGGGDTRMLNRTKNLLEEALSGRSVTCLICIASIKRNHAIWTCDHCYSYFHLSCIQKWANDSISLRNEENQGPVSVFIPKKVEWCCPKCRQAYSKEQIPRKYRCFCGKVDDPPQHPWQIPHTCGEVCGKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGICYCQKEHKKVRCSSAKWSCGQQCKKTLLCRAHKCETECHDGECPPCSYTSVQSCQCGREKSKRPCNDPFWQCTTPCNKPFSCGYHKCEKICHSGTCGSCPNSGMRSCPCGADQRLVQCPDVMETCLGTCGKRHDDCEHHCPEKCHKGPCPPCQVLIQKKCQCSTHTRSLPCSKEFKCETKCRGTRPCGKHGCAKKCCNGNCPPCEKSCDKPLQCGRHKCTNICHHGPCYPCPLESKVTCKCKETYLTVPCGRERFVKPPKCSIPCKVKYKCGHLVENKHSCHFGDCPPCKAICNKTYPKCGHECESTCHEYVAIVFKQVEKPATPWEVQPPKTKIMTLECPPCDVPVPITCFGEHETEDQPCHSAARRPCGRECGRPLACGNHKCTLLCHLFHSDPEYPHIPYACKPCNQGCQKRRPDKCAHKCAKAACHPGHCPPCEIYERIPCHCGTTELYLRCRELDTASEEILSCKQQCPKNLECGHRCRNTCHSGPCGTQTCTKKTKIHCQCGNLKKEAPCNAVRNSEAKVMCDESCEAKKLAAKIENEKEQQRLKQLEEERNKKELAEYEWKLSGKKKKYKEKKAIINKDDRNWVQKYWMPIFSVLVVVLAFLYYIFYL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00791763; iTF_00914170; iTF_00056224; iTF_00407250; iTF_00408080; iTF_00790876; iTF_00207522; iTF_00826500; iTF_00667048; iTF_00635086; iTF_00206673; iTF_00927186; iTF_00143571; iTF_01209908; iTF_00827669; iTF_01208885; iTF_00936253; iTF_00649694; iTF_00390980; iTF_00818829; iTF_00838109;
- 90% Identity
- -
- 80% Identity
- -