Pdol045962.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Plagodis dolabraria
Gene Symbol
nfxl1
Assembly
GCA_963854805.1
Location
OY978462.1:2275699-2278173[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 1 6.3e+04 -7.8 5.6 15 19 135 139 134 139 0.81
2 20 0.0052 3.3e+02 3.2 0.3 4 10 170 176 169 177 0.97
3 20 1.6e-07 0.0098 17.6 15.9 3 19 187 203 186 203 0.95
4 20 7.1e-08 0.0045 18.7 12.1 3 19 240 256 238 256 0.91
5 20 0.84 5.3e+04 -3.9 1.9 6 10 281 285 280 285 0.83
6 20 8e-10 5e-05 25.0 12.8 1 19 291 309 291 309 0.99
7 20 1.2e-05 0.73 11.7 20.6 4 19 347 362 345 362 0.93
8 20 1 6.3e+04 -5.3 2.2 5 10 385 390 385 390 0.88
9 20 7.4e-07 0.047 15.5 15.8 1 18 396 413 396 414 0.97
10 20 1.2e-08 0.00074 21.2 16.9 1 19 423 441 423 441 0.99
11 20 0.00012 7.3 8.5 7.2 9 19 489 499 480 499 0.78
12 20 0.00044 28 6.6 8.5 1 12 509 519 509 519 0.96
13 20 0.2 1.3e+04 -1.9 3.4 14 18 548 552 548 553 0.85
14 20 0.091 5.7e+03 -0.8 0.4 8 12 569 573 568 580 0.80
15 20 5.4e-06 0.34 12.7 4.0 1 11 589 599 589 600 0.97
16 20 0.41 2.6e+04 -2.9 1.9 15 18 614 617 612 618 0.62
17 20 0.0011 71 5.3 15.0 1 18 629 646 629 647 0.89
18 20 1 6.3e+04 -5.0 2.2 9 13 653 657 652 657 0.74
19 20 1.6e-06 0.1 14.4 13.3 1 16 688 702 688 707 0.90
20 20 0.15 9.6e+03 -1.5 0.3 7 11 722 726 716 727 0.72

Sequence Information

Coding Sequence
ATGTCGCGGCGCTATCGTGATGCCGCTGCGAAATTGCAGCAAAACGTTCAAAAGCATTTGAAAGAAATGAAAGATCATCTATCTTCCTCCGAAGATGAAGAGCCTTACGAAGCTAGTGTCTTGGATGGGGTGTTCCAGAGCTACTGGCGAGGAGGCGGAGACTCCCAAATGCTGAATAGAACAAAGAATCTCCTCGAAGAAGCTCTTAGCGGCCGTTCCGTTACATGCCTGATTTGCATCGCCTCCATCAAACGAATCCATGCCATATGGACCTGCGACCACTGCTATTGCTACTTCCATCTATCTTGCATACAAAAATGGGCGAACGATAGTATTAGTCTCCGGAGTGAAGAACAACAAGCTCCGGTTACGTTGTTCCGGCCGAAAAAAGTCGAATGGTGCTGTCCAAAATGCCGACATGCGTATAGTAAAGAGGAGATACCGCGCAAATACAGATGTTTTTGTGGCAAAACTGATGATCCACCACAACACCCATGGCAAATACCTCACACTTGTGGGGAAGTCTGTGGGAAAAGGCTTTCTACTGGAGATAGCTGCAAGCATAAATGCTTACTCCTATGCCATCCTGGTCCATGTCCACCATGCCCTCAAACTGTCAATGGAATTTGCTATTGTCAAAAGGAACAAAAGAAAGTCAGGTGCAGTACTGCTAAATGGTCTTGTGGCCAACAGTGCAATAAGACGCTAATATGTCAAACTCATAGGTGTGAAAATATATGCCATGATGGAGAATGTTCTCCTTGCAGCTATACTAGCACGCAGCCATGTCAATGTGGATATGAAAAATCAAAAAGACCCTGTGATGACCCATTTTGGCAGTGCAAGAAGCCTTGCAATAAGCCATTGTCATGTGGATATCATAAATGTGATAAGGTCTGCCACTCTGGTAGTTGTGGTTCTTGTCCAAACTCTGGCATGAGAACCTGCCCTTGTGGAGCTGACCAGCGCTTTGTCCAATGTCCAGATGTTATGGAAACCTGTTTGGGAActtgtaataaaaaacatgacAATTGTGATCACCATTGCCCAGAAAAATGCCATAAGGGTCCATGTCCTCCTTGCCAAGTCTTAATTCAGAAGAAATGTCAATGTTCAGCCCATACCAGATCTCTTCCCTGTAGTAAAGAATTCAAATGCGAAACCAAGTGCCGAGGAACAAGACCATGTGGGAAACATAGTTGTGCAAGAAAATGCTGCAATGGCATCTGTCCTCCTTGTGAGAAAACTTGTGACAAGCAGCTCCAATGTGGGCGTCATAAATGCACGACTATCTGCCATCATGGACCCTGCTACCCATGTCCATTAGAGTCCAAGGTGACCTGTAAATGTAAAGAGACTTATTTAACAGTTCCTTGTGGAAGAGAAAGATTTGTTAAACCACCGAAATGCACTGTCCTTTGCAAGGTGAAATATAAATGTGGACATACAGCAGAAAACAAACATTCCTGTCATTTTGGAGACTGTCCTCCTTGCAAGGCCATCTGTCATAAAACTTATCCAAAATGTGGACATGAATGTGAAGCTACTTGTCATGAATATGTAGCTGTTGTCTTTAAGCAGGTGGAAAAACCTGCAACACCATGGGAAGTGCAGCCcccaaaaactaaaattatgacTTTGGAATGCCCACCATGTGATGTTCCTGTCTCTATCATCTGCTTTGGGGAACATGAGACAGAAAATCAACCATGCCATTCAGCCTCACGTCGTCCATGTGGTAGAGAATGTGGGAGACCATTATCATGTGGAAATCACAACTGTGCATTACTTTGTCATCTATTCAAACCAGATGCTCAGTATCCAAATGTGCCTCACACTTGTAAGCCTTGCGATCGAGGCTGTGAGAAACCCCGTCCAAAGAAATGTTCACACAAATGTGCCAAAGGAGCTTGCCATCCGGGTGAATGTCCTCAGTGTGAAATTTATGAAAGACTACCTTGCCACTGTGGTACTACAGAACTTTACCTGTGCTGTCGTGAATACTGTGCAGCTACTGAAGAAATGCTATCATGCAAGCAGCAATGTCCAAAGAACTTAGAATGTGGCCACCGCTGCCGAAATACTTGCCATTCTGGACCTTGTGGAGAGCAAATATGTACTAAAAAGACTAAAATACACTGCCCTTGTGGGAATTTGAAAAGAGAAGCTCCATGTCATGCTGTTCGAAAAGGAGATGAAAGAGTTTCATGTGATGAATCCTGTGATGCAAAGAAACTAGCATCAAAGATTGAGAATGAAAAAGAACTATTTAGACTTAAACAGTTGGAGGAAGAGAGAAACAAGAAAGAGCTCGCTGAATATGAATGGAAACTTAGCggcaaaaagaaaaaatacaagGAAAAGAAGGTTGTTATGAACATTGACAATAGAAACTGGGTGCAAAAATACTGGATACCTATCCTGTCcatttttattgtgattttagccgctttgtattatatattttatgtatag
Protein Sequence
MSRRYRDAAAKLQQNVQKHLKEMKDHLSSSEDEEPYEASVLDGVFQSYWRGGGDSQMLNRTKNLLEEALSGRSVTCLICIASIKRIHAIWTCDHCYCYFHLSCIQKWANDSISLRSEEQQAPVTLFRPKKVEWCCPKCRHAYSKEEIPRKYRCFCGKTDDPPQHPWQIPHTCGEVCGKRLSTGDSCKHKCLLLCHPGPCPPCPQTVNGICYCQKEQKKVRCSTAKWSCGQQCNKTLICQTHRCENICHDGECSPCSYTSTQPCQCGYEKSKRPCDDPFWQCKKPCNKPLSCGYHKCDKVCHSGSCGSCPNSGMRTCPCGADQRFVQCPDVMETCLGTCNKKHDNCDHHCPEKCHKGPCPPCQVLIQKKCQCSAHTRSLPCSKEFKCETKCRGTRPCGKHSCARKCCNGICPPCEKTCDKQLQCGRHKCTTICHHGPCYPCPLESKVTCKCKETYLTVPCGRERFVKPPKCTVLCKVKYKCGHTAENKHSCHFGDCPPCKAICHKTYPKCGHECEATCHEYVAVVFKQVEKPATPWEVQPPKTKIMTLECPPCDVPVSIICFGEHETENQPCHSASRRPCGRECGRPLSCGNHNCALLCHLFKPDAQYPNVPHTCKPCDRGCEKPRPKKCSHKCAKGACHPGECPQCEIYERLPCHCGTTELYLCCREYCAATEEMLSCKQQCPKNLECGHRCRNTCHSGPCGEQICTKKTKIHCPCGNLKREAPCHAVRKGDERVSCDESCDAKKLASKIENEKELFRLKQLEEERNKKELAEYEWKLSGKKKKYKEKKVVMNIDNRNWVQKYWIPILSIFIVILAALYYIFYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01172943;
90% Identity
iTF_01209908;
80% Identity
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