Hchr023434.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hemistola chrysoprasaria
Gene Symbol
nfxl1
Assembly
GCA_947063395.1
Location
OX346733.1:846556-849021[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 3 2.9e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 20 0.016 1.5e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 20 4.6e-07 0.0045 17.7 15.9 3 19 186 202 185 202 0.95
4 20 5.3e-08 0.00052 20.7 12.3 3 19 239 255 237 255 0.91
5 20 2.4 2.3e+04 -3.8 1.1 6 10 280 284 279 284 0.88
6 20 1.5e-09 1.5e-05 25.6 10.8 1 18 290 307 290 308 0.97
7 20 5.3e-06 0.052 14.3 17.7 3 19 345 361 344 361 0.93
8 20 3 2.9e+04 -5.3 2.2 5 10 384 389 384 389 0.88
9 20 0.00039 3.8 8.3 16.6 2 18 396 412 395 413 0.91
10 20 3.5e-08 0.00034 21.2 16.9 1 19 422 440 422 440 0.99
11 20 0.0064 63 4.4 11.2 1 19 479 496 479 496 0.78
12 20 0.0044 43 4.9 7.2 1 12 506 516 506 516 0.96
13 20 0.52 5.1e+03 -1.7 3.3 14 18 545 549 545 550 0.85
14 20 0.73 7.2e+03 -2.2 0.2 8 11 566 569 565 570 0.80
15 20 0.00015 1.4 9.7 5.5 1 11 586 596 586 597 0.97
16 20 2.3 2.3e+04 -3.8 1.7 15 18 611 614 611 615 0.87
17 20 0.0017 16 6.3 16.7 1 18 626 643 626 644 0.89
18 20 3 2.9e+04 -6.5 3.4 9 13 650 654 650 654 0.71
19 20 1.5e-05 0.14 12.8 12.2 1 16 685 699 685 704 0.90
20 20 3 2.9e+04 -5.4 1.8 9 15 732 738 731 739 0.51

Sequence Information

Coding Sequence
ATGGCACGTCGTTACCGAGACGCCGCTGCGAAACTGCAGCAAAATGTTCAAAAGCATCTGAAAGAAATGAAAGACCTTTCTTCTTCCGAAGATGAGGAACCATACGAGGCGAGCGTGCTTGAGGGCGTGTTCCAGAGCTACTGGCGAGGCGGCGGAGACACTCACATGCTAAACAGAACCAAGAACCTTCTAGAAGAAGCTCTTAGCGGCCGACCTGTGACGTGTCTTATCTGCATTGCTTCTATCAAGAGAAACCATGCTATTTGGACCTGCGACCACTGCTATTCATACTTTCACCTATCTTGCATACAAAAATGGGCGAACGACAGCATTAGCTTACGCAGCGAGGAAAACCAAGGACCTGTGAGTGTATATGTGCCGAAGAAAATCGAATGGTGCTGCCCAAAGTGCCGACAAGCTTACAATAAAGATGAAATTCCTCGTAAGTATCTGTGTTTTTGTGAGAAAACCGACAATCCGCCACTACACCCATGGCAAATACCTCACACATGCGGGGAAGTTTGTGGAAAGAGGTTGTCATTAGGAGATAACTGTAAACATAAATGCTTGCTTCTCTGCCACCCTGGTCCCTGCCCGCCGTGTCCACAAACTGTAAATGGGATATGCTACTGTCAAAAAGAGCAGAAGAAAGTCAGATGTAGTTCCTCTAAGTGGTCCTGTGGTCAACTATGCAAGAAGACTCTTCCATGTCAAACACACAAGTGTGAAAATGTTTGCCATGATGGTGACTGTTCCCCTTGCAGCTACACCAGCATTCAACCTTGTCAGTGCGGGCAAGAGAGATCTAAAAGACCCTGTAATGACCCAACTTGGCAATGTGCTAAAGTATGCGGCAAGGCATTTTCTTGTGGCTACCATAAATGTGAAATCATATGTCACTCTGGCAATTGTGGTCCCTGTCTGAACACTGGGTTAAGATCCTGTCCATGTGGTGCCAATCAACGCTACGTACAATGCCCAGATGTCATGGAAACTTGCTTAGGAACATGCAGCAAAAAACATGAAGATTGTGAACATTCATGCCCAGAGAAATGCCATAAAGGCCAATGTCCACCCTGCCAAGTTTTAATTCAAAAGAAATGTCTATGTTCAACCCATACTCGATCTTTGCCATGCAGTAAGGAGTTTAAATGTGAGACTAAATGTAGAGGCACCAGACCGTGCAGAAAGCATCCTTGTGCTAGAAAATGCTGTAATGGCAACTGTCCCCCTTGCGAAAAAACATGCGATAAACCACTACAGTGTGGACGACACAAATGCACCACTATTTGCCATCATGGCCCATGCTACCCGTGTCCTTTAGAATCCAAAGTCACATGTAAATGTAAAGAGACTTACATAACCGTCCCATGCGGTAGAGAACGACTTGTCAAACCTCCTAAATGCAATCTTCCTTGCAAAGTTAAATACAAGTGTGGGCATGAAAACAGACATAACTGCCATTTTGGAGACTGTCCTCCTTGTAAAGCAATCTGTAATAAGACTTATCCCAAATGTGGGCATGAATGTGTGTCTGTTTGTCATGAATATGTAGCTGTAGTATTCAAGCAGGTGGAAAAGCCAGCAACACCATGGGAAGTACAGCCTCCAAAGACTAAAATCATGACTTTAGAGTGTCCCCCATGCAATGTCCCCATTTCAATCACTTGCTTTGGTGAACATGAGACAGAAGATCAACCATGTCACTTGGCTGCCAGAAGACCTTGTGGCAGAGACTGCGGTAGACCATTACCTTGTAGTAACCATAAATGCACTCAAATGTGTCATTTGTTTCAAGCTGATTTGCAATACCCAAATGTACCTTTTATTTGTAAGCCCTGCAATAAAGGTTGTGAAAAGCCCCGTCCGCCTAAATGCTCCCATAAGTGTTCTTTAGAAGCCTGCCATCCAGGACACTGCCCACCTTGTGAAGCTTATGAAAGGTTACCCTGTCATTGTGGTACTACCGAATTGTACCTACGCTGTAGGGAACTCAGCACGGCTACAGAAGAAATGTTATCGTGCAAGCAACAATGTCCAAAGAATTTAGAATGTGGCCATCGTTGCAGAAACACTTGCCATTCTGGAAAATGCGGCAACCAAATCTGTACaaagaaaactaaaatataCTGCCCTTGTGGTACTTTGAAAAAGGATGCCGCATGCAATGCTGTTAGAAGTGGAGAAGCCAAGGTATGTTGTGATAAAAGTTGTGAAACCAAACAATTAGCTGTGAAACTAGAAAATGAGAGAGAGCAGCAGAGACTCAAGTTGttagaagaagaaaaaaataaaaaagaactgGCTGAATATGAGTGGAAACTTAGTGGTAAAAAGAAGAAGTATAAAGAAAAAAAGGTTGTTATCGCCATAGATGAAAGAAATTGGCTGCAGAAGTATTGGATACCTATATTGTCAGTTATTATAGGGATTAGTGCGGGTCTATATTACATTCTTTACTTGTAA
Protein Sequence
MARRYRDAAAKLQQNVQKHLKEMKDLSSSEDEEPYEASVLEGVFQSYWRGGGDTHMLNRTKNLLEEALSGRPVTCLICIASIKRNHAIWTCDHCYSYFHLSCIQKWANDSISLRSEENQGPVSVYVPKKIEWCCPKCRQAYNKDEIPRKYLCFCEKTDNPPLHPWQIPHTCGEVCGKRLSLGDNCKHKCLLLCHPGPCPPCPQTVNGICYCQKEQKKVRCSSSKWSCGQLCKKTLPCQTHKCENVCHDGDCSPCSYTSIQPCQCGQERSKRPCNDPTWQCAKVCGKAFSCGYHKCEIICHSGNCGPCLNTGLRSCPCGANQRYVQCPDVMETCLGTCSKKHEDCEHSCPEKCHKGQCPPCQVLIQKKCLCSTHTRSLPCSKEFKCETKCRGTRPCRKHPCARKCCNGNCPPCEKTCDKPLQCGRHKCTTICHHGPCYPCPLESKVTCKCKETYITVPCGRERLVKPPKCNLPCKVKYKCGHENRHNCHFGDCPPCKAICNKTYPKCGHECVSVCHEYVAVVFKQVEKPATPWEVQPPKTKIMTLECPPCNVPISITCFGEHETEDQPCHLAARRPCGRDCGRPLPCSNHKCTQMCHLFQADLQYPNVPFICKPCNKGCEKPRPPKCSHKCSLEACHPGHCPPCEAYERLPCHCGTTELYLRCRELSTATEEMLSCKQQCPKNLECGHRCRNTCHSGKCGNQICTKKTKIYCPCGTLKKDAACNAVRSGEAKVCCDKSCETKQLAVKLENEREQQRLKLLEEEKNKKELAEYEWKLSGKKKKYKEKKVVIAIDERNWLQKYWIPILSVIIGISAGLYYILYL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01172943;
90% Identity
iTF_00791763;
80% Identity
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