Mlit011585.1
Basic Information
- Insect
- Macaria liturata
- Gene Symbol
- nfxl1
- Assembly
- GCA_964023185.1
- Location
- OZ026814.1:11438570-11441044[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 1 2.7e+04 -7.8 5.6 15 19 135 139 134 139 0.81 2 20 0.0052 1.4e+02 3.2 0.3 4 10 170 176 169 177 0.97 3 20 1.6e-07 0.0042 17.6 15.9 3 19 187 203 186 203 0.95 4 20 0.074 2e+03 -0.5 3.5 1 8 228 234 228 235 0.89 5 20 4e-07 0.011 16.3 10.1 4 19 241 256 238 256 0.93 6 20 0.89 2.4e+04 -4.0 1.4 6 10 281 285 280 285 0.83 7 20 1.8e-08 0.00048 20.6 14.4 1 19 291 309 291 309 0.99 8 20 7.2e-07 0.02 15.5 17.8 4 19 347 362 345 362 0.93 9 20 1 2.7e+04 -5.3 2.2 5 10 385 390 385 390 0.88 10 20 3e-06 0.08 13.5 18.3 1 18 396 413 396 414 0.97 11 20 4e-09 0.00011 22.7 16.9 1 19 423 441 423 441 0.99 12 20 0.0001 2.8 8.6 6.4 9 19 489 499 487 499 0.89 13 20 0.19 5.2e+03 -1.8 6.0 3 12 510 519 509 519 0.89 14 20 0.19 5e+03 -1.8 3.3 14 18 548 552 548 553 0.85 15 20 0.091 2.5e+03 -0.8 0.4 8 12 569 573 568 580 0.80 16 20 5.1e-06 0.14 12.8 4.8 1 11 589 599 589 600 0.97 17 20 0.43 1.2e+04 -3.0 1.3 15 18 614 617 613 618 0.85 18 20 0.00078 21 5.8 15.0 4 18 631 646 629 647 0.88 19 20 0.71 1.9e+04 -3.6 0.9 5 10 664 669 664 669 0.91 20 20 2.4e-06 0.066 13.8 11.2 1 18 688 706 688 707 0.89
Sequence Information
- Coding Sequence
- ATGTCCCGAAAATACCGCGACGCGGCGGCCAAACTGCAGCAAAATGTGCAAAAGCATTTGAAAGAAATGAAGGATCATCTCTCCTCTTCTGAAGATGAAGAGCCCTACGAGGCGAGCGTGCTGGAGGGAGTGTTCCAGAGCTACTGGAGAGGTGGCGGGGATAGTCAGATGCTGAACAGAACTAAGAATCTTCTGGAAGAAGCTCTCAGCGGTCGCTCCGTTACCTGCCTCATTTGCATCGCTTCTATCAAACGAAACCACGCCATATGGACGTGCGATCATTGCTACTCCTACTTCCATCTATCCTGCGTACAGAAATGGGCTAACGACAGCATAAGCCTGCGAACTGAAGAGAATCATGGCCCTATCACAGTGCATGTGCCGAAAAAAGTCGAATGGTGCTGCCCAAAGTGTCGGCAAACTTACAACAAGGAACAAATACCTCGTAAATATAGATGTTTCTGTGGTAAGACTGACAACCCACCTCAGCACCCGTGGCAACTCCCTCATACCTGTGGAGAAGTCTGTGGCAAGAGGTTGTCAACTGGTGATAACTGCAAACACAAATGTCTACTACTCTGTCACCCGGGGCCGTGCCCTCCGTGCCCACAGACTGTCAACGGTATATGCTACTGCCAAAAAGAACAAAAGAAAGTGAGATGTAGCTCAGCTAAATGGTCCTGTGGGCATCAGTGTAAGAAAACACTTCTCTGTCTAGCTCATAAGTGTGAAAACATCTGCCATGACAGTGACTGTCCTCCATGCAGCTACACCAGTCTGCAGCCATGCCAGTGTGGATATGAAAAGTCCAAAAGACCTTGCAACGATCCTTTCTGGCAGTGTACAAGACCCTGCAACAAACCTTTTTCTTGTGGCTATCATAAATGTGAGAAGGTCTGTCACTCGGGCGGTTGTGGAGACTGTCCCAACTCTGGCAAGAGATCCTGTCCCTGTGGAGCAAACCAGCGCTTTGTTCAGTGCCCTGATGTCATGGAGACATGTCTTGGCACTTGCAGCAAAAAACACTCTGATTGTGACCACAGCTGTCCTGAAAAATGCCACAAAGGTCCCTGTCCACCTTGCCAAGTTTTGATACAAAAGAAATGCCTGTGCTCAACTCATACTAGGTCCTTACCATGTAGCAAAGAGTTCAAATGTGAGACCAAGTGTAGAGGAACAAGACCTTGTGGGAAACATGGGTGTGCTAGAAAATGCTGCAATGGAAACTGCCCTCCGTGTGAGAAAACTTGTGACAAGCCGCTGCAATGTGGACGCCACAAGTGCACCAATATCTGCCATCATGGACCTTGCTACCCATGCCCTTTGGAATCCAAGGTCACCTGCAAATGCAAGGAGACCTATATCACAGTCCCATGTGGGAGAGAGAGATTTGTGAAGCCCCCTAAATGTACTATACCTTGCAAAGTAAAATACAAATGTGGACATTCCATAGAGAACAAGCATTCCTGCCACTTCGGAGACTGTCCTCCTTGCAAAGCTGTCTGTAATAAAAGTTATCCTAAATGTGAACATATGTGTGTAGCTACTTGTCATGAATATGTAGCTGTAGTATTCAAGCAAGTGGAAAAGCCGGCTACACCCTGGGAAGTTCAACCCCCTAAGACCAAGATAATGACTTTGGAATGTCCTCCCTGTGAAATTCCTATCCCAATCATATGTTTTGGAGAGCATGAGACAGAAAACCAACCATGTCACTCTGCATCTCGCAGGCCATGTGGTAGAGAGTGTGGGCGACCTCTTGCCTGTGGAAATCACAACTGTTCTGTACTATGTCATCTGTTTGAAGCTGATCATCAGTATCCAAATGTGCCTTATACATGTAAGCCTTGCGACAGAGGCTGTGAGAAACCCCGTCCAGAAAAATGTGTACATAAATGTAGTAAGGGAGCTTGCCACCCGGGCACATGCCCTCCTTGTGAGGTGTATGAGCGTGTTGCCTGCCACTGTGGCACTACAGAGCTATACCTGCGCTGCCGAGAACTTTGCACTGCAACAGAAGAGATACTGTCTTGCAAACAGCAGTGCCCCAAGAACCTGGAATGTGGCCACAGATGTCGCAACACATGCCATGTTGGTAATTGTGCTAAACAAACATGTACCAAAAAGACTAAGATACACTGCCAGTGTGGAAATTTGAAACGAGAAGCTCCATGCAATGTTGTTAGAAGTGGCGAAGCTAAAGTAGTCTGTGACCAGTCTTGTGAAGGCAAAAAAGCTGCTGCAAAAATTGAACAAGAAAAAGAACAGCAGAAGCTGAAACAGTTAGAAGAAGAGAGAAATAAGAAAGAACTAGCTGAATATGAATGGAAGCTGAGtgggaaaaagaagaagtataaaGAAAAGAAAGTTATTGTAAACACAGATGACAGGAACTGGTTGCATAAGTATTGGATACCCATACTGTctgtttttatagttattattgCTGCTCTttactacatattttatgtatga
- Protein Sequence
- MSRKYRDAAAKLQQNVQKHLKEMKDHLSSSEDEEPYEASVLEGVFQSYWRGGGDSQMLNRTKNLLEEALSGRSVTCLICIASIKRNHAIWTCDHCYSYFHLSCVQKWANDSISLRTEENHGPITVHVPKKVEWCCPKCRQTYNKEQIPRKYRCFCGKTDNPPQHPWQLPHTCGEVCGKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGICYCQKEQKKVRCSSAKWSCGHQCKKTLLCLAHKCENICHDSDCPPCSYTSLQPCQCGYEKSKRPCNDPFWQCTRPCNKPFSCGYHKCEKVCHSGGCGDCPNSGKRSCPCGANQRFVQCPDVMETCLGTCSKKHSDCDHSCPEKCHKGPCPPCQVLIQKKCLCSTHTRSLPCSKEFKCETKCRGTRPCGKHGCARKCCNGNCPPCEKTCDKPLQCGRHKCTNICHHGPCYPCPLESKVTCKCKETYITVPCGRERFVKPPKCTIPCKVKYKCGHSIENKHSCHFGDCPPCKAVCNKSYPKCEHMCVATCHEYVAVVFKQVEKPATPWEVQPPKTKIMTLECPPCEIPIPIICFGEHETENQPCHSASRRPCGRECGRPLACGNHNCSVLCHLFEADHQYPNVPYTCKPCDRGCEKPRPEKCVHKCSKGACHPGTCPPCEVYERVACHCGTTELYLRCRELCTATEEILSCKQQCPKNLECGHRCRNTCHVGNCAKQTCTKKTKIHCQCGNLKREAPCNVVRSGEAKVVCDQSCEGKKAAAKIEQEKEQQKLKQLEEERNKKELAEYEWKLSGKKKKYKEKKVIVNTDDRNWLHKYWIPILSVFIVIIAALYYIFYV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01172943;
- 90% Identity
- -
- 80% Identity
- -