Istr021322.1
Basic Information
- Insect
- Idaea straminata
- Gene Symbol
- nfxl1
- Assembly
- GCA_951213275.1
- Location
- OX577869.1:271535-274006[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 2 2.8e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 21 0.01 1.5e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 21 3.1e-07 0.0044 17.7 15.9 3 19 186 202 185 202 0.95 4 21 9.8e-07 0.014 16.1 19.3 3 19 239 255 226 255 0.92 5 21 0.35 5e+03 -1.7 1.0 6 10 280 284 279 284 0.92 6 21 3.2e-07 0.0046 17.6 11.7 1 19 290 308 290 308 0.99 7 21 2.7e-06 0.039 14.6 20.1 3 19 345 361 337 361 0.86 8 21 2 2.8e+04 -5.3 2.2 5 10 384 389 384 389 0.88 9 21 2.9e-06 0.041 14.5 18.2 1 18 395 412 395 413 0.97 10 21 3.5e-07 0.0049 17.5 16.1 1 19 422 440 422 440 0.96 11 21 0.46 6.5e+03 -2.1 1.0 5 10 468 473 468 473 0.92 12 21 0.0002 2.9 8.6 6.4 9 19 488 498 486 498 0.89 13 21 0.0021 29 5.4 8.6 1 12 508 518 508 518 0.96 14 21 0.25 3.5e+03 -1.2 3.4 14 19 547 552 547 552 0.87 15 21 0.11 1.6e+03 -0.1 0.5 7 12 567 572 567 579 0.82 16 21 3.2e-06 0.045 14.4 4.7 1 11 588 598 588 599 0.97 17 21 1.6 2.2e+04 -3.8 1.7 15 18 613 616 613 617 0.87 18 21 5.8e-05 0.82 10.4 14.0 1 18 628 645 628 646 0.89 19 21 2 2.8e+04 -6.5 3.4 9 13 652 656 652 656 0.71 20 21 0.16 2.2e+03 -0.6 3.0 6 12 677 683 676 683 0.89 21 21 1.3e-06 0.019 15.6 11.7 1 16 687 701 687 706 0.87
Sequence Information
- Coding Sequence
- ATGGCCAGGCGATACCGTGACGCAGCTGCGAAATTGCAGCAAAACGtgcaaaaacatttaaaagagATGAAGGACCTTTCTTCATCAGAAGACGAGGAACCTTTCGAGTCGAGCGTGTTGGATGGCGTGTTCCAGAGTTACTGGCGAGGCGGGGGAGACACCCACATGCTGAACAGAACCAAGAATCTACTAGAAGAAGCGATCAGCGGCCGCTCCGTCACCTGCCTCATTTGCATCGCATCCATCAAACGAAATCATGCGATCTGGACCTGTGACCACTGTTTCTCCTACTTCCACTTGTCTTGCATACAAAAATGGGCGAATGACAGTATAAGTCTACGCACAGAAGAGCCCCAAGCACCCATCGCAGTGTTTAAACCGTTAAAAATCGAATGGTGTTGTCCCAAGTGTCGCAATTCGTATAGTAAGGATCAAATACCTCGTAAATACAGGTGTTTTTGTAGTAAAACTGATGATCCACCTTTCCATCCTTGGTTAATACCACATACATGTGGGGAAGTATGCGGAAAGAGATTATCAACAGGCGAGAACTGTAAACATAAATGTTTGTTACTATGCCACCCTGGTCCATGCCCGCCTTGCCCACAAACTGTGAACGGAGTATGTTACTGTCAGAAAGAGAGGAAAAAAGTTCGATGCAGTACTGCCCGCTGGTCCTGCGGTCAACAGTGCCACAAAACTCTGCCCTGTCAGACGCATAAGTGTGAAAACATTTGTCATGATGGAGACTGTCCACCTTGCAGCTACACAAGCACACAGTCATGCCGGTGTGGTGCCGAGAAGTCCAAACGACCATGCAATGACCCTTACTGGCACTGCCAGAAGGTCTGTAACAAACCATTTTCTTGCGGCTATCACAAATGTGACAAGATATGTCACTCGGAAAATTGTGGTACTTGCCCTAACTCCGGAATGCGATCCTGCCCTTGCGGAGCAAATAAGAAATATGTCCAATGCCCTGATGTGATGGAGACCTGCCTTGGAACCTGCGGGAAGAAGCATGAAGACTGCGAACACAACTGCCCTGAAAAATGCCACAAAGGACCTTGTCCCCCATGTCAAGTCCTTATTCAAAAGAAATGTTTCTGTTCAACACACACCAGATCGCTGCCATGCAGCAAGGAATTCAAATGTGAGACAAAGTGTAGAGGCACTAGGCCATGTGGGAAACACCCTTGTGCAAGAAAATGCTGCAACGGTAACTGCCCACCATGTGAAAAGTTATGCGACAAGCCACTTCAATGCAATCGACACAAATGTACCAATGTTTGTCATCATGGACCTTGCTACCCGTGCCCTTTGGAATCAAAGGTCACTTGCAGATGTAAAGAGACATACATAACTGTCCCATGTGGAAGAGAAAGGTTTGTTAAACCACCAAAATGCAACCGTCCTTGTAAACTCAAATATAAATGTGGTCATATTGAAGAAAATAAGCATTCATGTCATTTCGGCGATTGCCCTCCTTGTAAAGCTATTTGCTACAAGAAGTATAATAAATGTGGACATGAATGCAAGGCTACATGTCACGAATATGTGCCTGTTGTGTTCAAACAGGTTGAAAAGCCAGCAACGCCTTGGGAAGTGCAGCCACCAAAAACGAAAATCATGACTCTTGACTGCCCACCATGTACCGTGCCCGTTTCTATAATCTGCTTTGGGGAACATGAGACAGACGAACAACCCTGTCACTCTGCAGCACGCAGGCCTTGCGGCCGAGAATGTGGCAAACCACTGCCCTGTGGAAACCATACTTGTTCTCTTCTCTGTCATTTATACAACTCGGATCCCAACTATCCAGAAGTGCCTTATATTTGCAAGCCTTGCAACCGAGACTGCGTGAAACCCCGTCCAAAGATATGTAGCCATAAATGTTCAATTCAAGCATGTCACCCGGGGTCATGTCCACCTTGTGAGCTTATAGAAAGACTACCGTGCCACTGTGGAGTCATCGAGCTCTATTTACGATGCCGTGAGTTGACAACCGCAACTGAAGATATGCTATCCTGTAAGCAACAATGCCATAAGAACTTGAAATGTGGGCATCGTTGCCGTAACCTATGCCATTCGGGACCATGCACCACCCAAGTGTGCACAAGAAAGACTAAAATATACTGTCCCTGTGGTAACATAAAAAAGGAAGCTCCTTGCAATTTGGTCCAGAACGGAGAAGCAAAGATTACTTGTGATGAAAACTGTACAGCCAAACAAGAATCTGTTAAACTAGAGAAGGAGACAGAGCAACAGAGATTAAAGCAGTTAGAAGAAGAGAGAAATAAGAAGGAACTGGctaaatatgaatggaaacttagcgggaagaagaagaagtataaGGAAAAGAAGGTTGTGGTCAAAAAGGATGATAAGTCCTGGCTCAGGAGATACTTGGTTCCTACTTTATCGCTATTTGTTGTTATTCTGGCTGCTATTTAttacattatgtatttataa
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLKEMKDLSSSEDEEPFESSVLDGVFQSYWRGGGDTHMLNRTKNLLEEAISGRSVTCLICIASIKRNHAIWTCDHCFSYFHLSCIQKWANDSISLRTEEPQAPIAVFKPLKIEWCCPKCRNSYSKDQIPRKYRCFCSKTDDPPFHPWLIPHTCGEVCGKRLSTGENCKHKCLLLCHPGPCPPCPQTVNGVCYCQKERKKVRCSTARWSCGQQCHKTLPCQTHKCENICHDGDCPPCSYTSTQSCRCGAEKSKRPCNDPYWHCQKVCNKPFSCGYHKCDKICHSENCGTCPNSGMRSCPCGANKKYVQCPDVMETCLGTCGKKHEDCEHNCPEKCHKGPCPPCQVLIQKKCFCSTHTRSLPCSKEFKCETKCRGTRPCGKHPCARKCCNGNCPPCEKLCDKPLQCNRHKCTNVCHHGPCYPCPLESKVTCRCKETYITVPCGRERFVKPPKCNRPCKLKYKCGHIEENKHSCHFGDCPPCKAICYKKYNKCGHECKATCHEYVPVVFKQVEKPATPWEVQPPKTKIMTLDCPPCTVPVSIICFGEHETDEQPCHSAARRPCGRECGKPLPCGNHTCSLLCHLYNSDPNYPEVPYICKPCNRDCVKPRPKICSHKCSIQACHPGSCPPCELIERLPCHCGVIELYLRCRELTTATEDMLSCKQQCHKNLKCGHRCRNLCHSGPCTTQVCTRKTKIYCPCGNIKKEAPCNLVQNGEAKITCDENCTAKQESVKLEKETEQQRLKQLEEERNKKELAKYEWKLSGKKKKYKEKKVVVKKDDKSWLRRYLVPTLSLFVVILAAIYYIMYL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01172943;
- 90% Identity
- -
- 80% Identity
- -