Ppul042689.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Plagodis pulveraria
Gene Symbol
nfxl1
Assembly
GCA_963890685.1
Location
OY982971.1:1953212-1955686[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 5.8e+04 -7.8 5.6 15 19 135 139 134 139 0.81
2 20 0.01 3.1e+02 3.2 0.3 4 10 170 176 169 177 0.97
3 20 3.1e-07 0.009 17.6 15.9 3 19 187 203 186 203 0.95
4 20 1.4e-07 0.0041 18.7 12.1 3 19 240 256 238 256 0.91
5 20 1.7 4.9e+04 -3.9 1.9 6 10 281 285 280 285 0.83
6 20 2.6e-09 7.7e-05 24.3 12.5 1 19 291 309 291 309 0.99
7 20 2.3e-05 0.68 11.7 20.6 4 19 347 362 345 362 0.93
8 20 2 5.8e+04 -5.3 2.2 5 10 385 390 385 390 0.88
9 20 1.5e-06 0.043 15.5 15.8 1 18 396 413 396 414 0.97
10 20 1.4e-08 0.00042 21.9 17.3 1 19 423 441 423 441 0.99
11 20 0.00027 7.7 8.3 7.4 9 19 489 499 480 499 0.78
12 20 0.031 8.9e+02 1.7 1.7 6 12 498 504 498 504 0.94
13 20 0.00089 26 6.6 8.5 1 12 509 519 509 519 0.96
14 20 0.4 1.2e+04 -1.9 3.4 14 18 548 552 548 553 0.85
15 20 0.25 7.3e+03 -1.2 0.3 8 12 569 573 568 580 0.79
16 20 1.1e-05 0.32 12.7 4.0 1 11 589 599 589 600 0.97
17 20 0.82 2.4e+04 -2.9 1.9 15 18 614 617 612 618 0.62
18 20 0.026 7.6e+02 1.9 15.5 1 18 629 646 629 647 0.90
19 20 2 5.8e+04 -5.0 2.2 9 13 653 657 652 657 0.74
20 20 3.2e-06 0.094 14.4 13.3 1 16 688 702 688 707 0.90

Sequence Information

Coding Sequence
ATGTCGCGGCGCTATCGTGATGCCGCTGCGAAATTGCAGCAAAACGTTCAAAAGCATTTAAAAGAAATGAAAGATCATCTATCTTCCTCCGAGGATGAAGAGCCTTATGAGCCCAGTGTCTTGGATGGGGTGTTCCAGAGCTACTGGCGAGGAGGTGGAGACTCCCAAATGCTGAATAGAACAAAGAATCTGCTCGAAGAAGCTCTTAGCGGCCGTTCTGTTACATGCCTGATTTGCATCGCCTCCATCAAACGAATCCATGCCATATGGACCTGCGACCACTGCTACTGCTACTTCCATCTATCTTGCATACAAAAATGGGCGAACGATAGTATAAGTCTCCGGAGTGAAGAACATCAAGCCCCGGTTACGGTATTCCGGCCGAAAAAAGTAGAATGGTGCTGTCCAAAATGCCGACATGCTTATAGTAAAGAGGAGATTCCGCGCAAGTACAGATGTTTTTGTGGCAAAACTGATGATCCACCACAGCACCCATGGCAAATACCTCATACATGTGGTGAAGTCTGTGGGAAAAGGCTTTCTACTGGAGATAGCTGCAAGCATAAATGCTTACTACTATGCCATCCTGGTCCATGTCCACCATGCCCTCAAACTGTCAATGGAATTTGCTATTGTCAAAAGGAACAAAAGAAAGTTAGGTGCAGTACTGCTAAATGGTCTTGTGGCCAACAGTGCAATAAGACGCTAATCTGTCAAACTCATAGGTGTGAAAATATATGTCATGATGGGGAATGTTCTCCTTGCAGCTATACTAGCACGCAGCCATGTCAATGTGGATATGAAAAGTCAAAAAGACCCTGCGATGACCCATTTTGGCAGTGCAAGAAGCCTTGCAATAAGCCATTGTCATGTGGATATCATAAATGTGACAAGATCTGCCACTCTGGAAGTTGTGGTTCTTGCCCAAACTCTGGCATGCGATCCTGCCCTTGTGGAGCTGACCAGCGCTTTGTCCAATGTCCAGATGTTATGGAACCATGTTTGGGaacttgtaataaaaaacatgacaaTTGTGATCACCATTGCCCAGAAAAATGCCATAAGGGTCCATGTCCACCTTGCCAAGTCTTAATTCAGAAGAAATGTCAATGTTCAGCCCATACCAGATCTCTTCCTTGTAGTAAAGAATTTAAATGCGAAACCAAATGCCGAGGAACAAGACCGTGTGGAAAACATAGCTGTGCAAGAAAATGCTGCAATGGCATCTGTCCTCCTTGTGAGAAAACTTGTGACAAGCAGCTCCAATGTGGGCGTCATAAATGCACCACTGTCTGCCATCATGGTCCCTGCTACCCATGTCCGTTAGAGTCCAAGGTGACCTGTAAATGTAAAGAGACTTATTTAACTGTCCCATGTGGAAGAGAAAGATTTGTTAAACCACCAAAATGCACTGTCCTTTGCAaggtaaaatataaatgtggACATACAGCAGAAAACAAACATTCCTGTCATTTTGGAGACTGTCCACCTTGCAAGGCCGTCTGTCATAAAACTTATCCAAAATGTGGACATGAATGTGAAGCTACCTGTCATGAATATGTAGCTGTTGTCTTCAAACAGGTGGAAAAACCTGCAACACCGTGGGAAGTGCAGCCcccaaaaactaaaattatgacTTTGGAATGCCCACCATGTGATGTTCCTGTCTCTATCATCTGCTTTGGGGAACATGAGACAGAAAATCAACCATGCCATGCAGCCTCACGTCGACCATGTGGACGAGAATGTGGGAGACCATTATCATGTGGAAATCATAACTGTGCATTACTCTGTCATCTATTCAAACCAGATGCTCAGTATCCAAATGTGCCTCACACCTGTAAGCCTTGCGATCGAGGCTGTGAGAAACCCCGTCCAAAGAAATGTTCACACAAGTGTGCCAGAGGAGCTTGCCATCCTGGTGGATGTCCTCAGTGTGAAATTTATGAAAGACTACCTTGCCACTGTGGTACTACAGAACTTTACCTGCGCTGTCGTGAATTCTGTGCAGCTACTGAAGAAATGCTATCATGCAAGCAGCAATGTCCAAAGAACTTAGAATGTGGCCACCGCTGCCGAAATACTTGCCATTCTGGACCTTGTGGAGAGCAAATATGTACTAAAAAGACTAAAATACACTGCCCTTGTGGAAATTTGAAAAGAGAAGCTCCATGTAATGCTGTCAGAAAAGGAGAAGAAAGAGTTTCATGTAATGAATCCTGTGATGCAAAGAAACTAGCTTCAAAGATTGAGAATGAAAAAGAACAACTAAGACTTAAACAGTTGGAGGAAGAGAGAAACAAGAAAGAGCTGGCTGAATATGAATGGAAACTTAGcggcaaaaagaaaaaatacaaggAAAAGAAGGTTGTTCTAAACACTGACAATAGAAACTGGGTACAGAAGTATTGGATACCCATCCTGTCCatttttgttgtgattttagcagctttgtattatatattttatgtatag
Protein Sequence
MSRRYRDAAAKLQQNVQKHLKEMKDHLSSSEDEEPYEPSVLDGVFQSYWRGGGDSQMLNRTKNLLEEALSGRSVTCLICIASIKRIHAIWTCDHCYCYFHLSCIQKWANDSISLRSEEHQAPVTVFRPKKVEWCCPKCRHAYSKEEIPRKYRCFCGKTDDPPQHPWQIPHTCGEVCGKRLSTGDSCKHKCLLLCHPGPCPPCPQTVNGICYCQKEQKKVRCSTAKWSCGQQCNKTLICQTHRCENICHDGECSPCSYTSTQPCQCGYEKSKRPCDDPFWQCKKPCNKPLSCGYHKCDKICHSGSCGSCPNSGMRSCPCGADQRFVQCPDVMEPCLGTCNKKHDNCDHHCPEKCHKGPCPPCQVLIQKKCQCSAHTRSLPCSKEFKCETKCRGTRPCGKHSCARKCCNGICPPCEKTCDKQLQCGRHKCTTVCHHGPCYPCPLESKVTCKCKETYLTVPCGRERFVKPPKCTVLCKVKYKCGHTAENKHSCHFGDCPPCKAVCHKTYPKCGHECEATCHEYVAVVFKQVEKPATPWEVQPPKTKIMTLECPPCDVPVSIICFGEHETENQPCHAASRRPCGRECGRPLSCGNHNCALLCHLFKPDAQYPNVPHTCKPCDRGCEKPRPKKCSHKCARGACHPGGCPQCEIYERLPCHCGTTELYLRCREFCAATEEMLSCKQQCPKNLECGHRCRNTCHSGPCGEQICTKKTKIHCPCGNLKREAPCNAVRKGEERVSCNESCDAKKLASKIENEKEQLRLKQLEEERNKKELAEYEWKLSGKKKKYKEKKVVLNTDNRNWVQKYWIPILSIFVVILAALYYIFYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01172943;
90% Identity
iTF_01208885;
80% Identity
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